RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 REPS2Q8NFH8 660 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 KBTBD8Q8NFY9 601 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 LMO3Q8TAP4 145 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 PNPT1Q8TCS8 783 aaKnown RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 PRR11Q96HE9 360 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 GPR88Q9GZN0 384 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 MUC3BQ9H195 1237 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 PNMA8BQ9ULN7 279 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 TBC1D30Q9Y2I9 924 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 TSPAN3O60637 253 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 GPIP06744 558 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 CAPGP40121 348 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 PPP3CCP48454 512 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 ENTPD1P49961 510 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 VPS26BQ4G0F5 336 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 PKN3Q6P5Z2 889 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 MIB1Q86YT6 1006 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 TMEM132CQ8N3T6 1108 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 SMYD1Q8NB12 490 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 PCDH19Q8TAB3 1148 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 PLEKHO2Q8TD55 490 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 H2AFY2Q9P0M6 372 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 SIRPGQ9P1W8 387 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 IPPQ9Y573 584 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 DCCP43146 1447 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 NFASCO94856 1347 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 YDJCA8MPS7 323 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 F8W810 466 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 G3V2T6 193 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 MAFO75444 373 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 B3GAT3O94766 335 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 METTL18O95568 372 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 GUCA1CO95843 209 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 SERPINF2P08697 491 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 MATKP42679 507 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 LHX1P48742 406 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 ENPEPQ07075 957 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 MERTKQ12866 999 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 PWP1Q13610 501 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 INO80DQ53TQ3 878 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 SLC9A4Q6AI14 798 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 NECAB2Q7Z6G3 386 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 TTC30BQ8N4P2 665 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 CMASQ8NFW8 434 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 AZIN2Q96A70 460 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 OLFM1Q99784 485 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 TRIM45Q9H8W5 580 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 MAGEL2Q9UJ55 1249 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 MRPL42Q9Y6G3 142 aaKnown RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 STX16-NPEPL1H3BU86 382 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 CCNKO75909 580 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 THRBP10828 461 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 ALOX15P16050 662 aaPredicted RBP13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZNF37AP17032 561 aaPredicted RBP13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 S100A3P33764 101 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 IDH2P48735 452 aaKnown RBP13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 SEPHS1P49903 392 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 DLG2Q15700 870 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 MAPKAPK3Q16644 382 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 DENND5AQ6IQ26 1287 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 LCLAT1Q6UWP7 414 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 TFAP2DQ7Z6R9 452 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 SIX5Q8N196 739 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 FAM45AQ8TCE6 357 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 GATA6Q92908 595 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 ASB9Q96DX5 294 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 TPD52L3Q96J77 140 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 KRT84Q9NSB2 600 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 TBCCD1Q9NVR7 557 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZMYM5Q9UJ78 669 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 ADAMTS6Q9UKP5 1117 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 TELO2Q9Y4R8 837 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 MDM4O15151 490 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 TPTEP56180 551 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 PITRM1Q5JRX3 1037 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 ARHGAP17Q68EM7 881 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 GLYATQ6IB77 296 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 OR52E8Q6IFG1 317 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 GPSM1Q86YR5 675 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 ARMC7Q9H6L4 198 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 SNX8Q9Y5X2 465 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 FAM159BA6NKW6 160 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 MFSD11O43934 449 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 TNFRSF21O75509 655 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 PDE9AO76083 593 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 UBA1P22314 1058 aaKnown RBP13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 FMO4P31512 558 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 OAZ1P54368 228 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 MPP5Q8N3R9 675 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZNF516Q92618 1163 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 C19orf60Q96EN9 201 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 NTPCRQ9BSD7 190 aaKnown RBP13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 CCDC106Q9BWC9 280 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 ELOVL4Q9GZR5 314 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 ELP3Q9H9T3 547 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 CCNB1IP1Q9NPC3 277 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 ABI2Q9NYB9 513 aaPredicted RBP13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 VWA7Q9Y334 891 aa13.19□□□□□ -0.3
PCDHGB3-201ENST00000576222 A0A088AWK7 358 aa13.18□□□□□ -0.3
PCDHGB3-201ENST00000576222 A0A1B0GVG6 124 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms