RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 TUBGCP5Q96RT8 1024 aa20.34■□□□□ 0.85
ABCA3-206ENST00000569062 UCKL1Q9NWZ5 548 aa20.34■□□□□ 0.85
ABCA3-206ENST00000569062 UVRAGQ9P2Y5 699 aa20.34■□□□□ 0.85
ABCA3-206ENST00000569062 KMT2BQ9UMN6 2715 aaPredicted RBP20.34■□□□□ 0.85
ABCA3-206ENST00000569062 TTC24A2A3L6 582 aaPredicted RBP20.33■□□□□ 0.85
ABCA3-206ENST00000569062 TM7SF2O76062 418 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 PROSCO94903 275 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 PEX11BO96011 259 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 PRKCGP05129 697 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 XPAP23025 273 aaPredicted RBP20.33■□□□□ 0.85
ABCA3-206ENST00000569062 SCNN1BP51168 640 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 ARSEP51690 589 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 TAS2R40P59535 323 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 SEMG2Q02383 582 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 NSUN2Q08J23 767 aaKnown RBP eCLIP20.33■□□□□ 0.85
ABCA3-206ENST00000569062 TSR1Q2NL82 804 aaKnown RBP20.33■□□□□ 0.85
ABCA3-206ENST00000569062 TMEM52BQ4KMG9 183 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 TPRG1LQ5T0D9 272 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 DENND6BQ8NEG7 585 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 CENPTQ96BT3 561 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 NHEJ1Q9H9Q4 299 aaPredicted RBP20.33■□□□□ 0.85
ABCA3-206ENST00000569062 PCDH12Q9NPG4 1184 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 SPTLC3Q9NUV7 552 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 COQ6Q9Y2Z9 468 aa20.33■□□□□ 0.85
ABCA3-206ENST00000569062 USP24Q9UPU5 2620 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 RIOK3O14730 519 aaKnown RBP20.32■□□□□ 0.84
ABCA3-206ENST00000569062 MAFKO60675 156 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 TMEM253P0C7T8 217 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 DGKAP23743 735 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 SERPINA4P29622 427 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 IGFALSP35858 605 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 RABIFP47224 123 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 SUOXP51687 545 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 PFN3P60673 137 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 ELP6Q0PNE2 266 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 PDE1CQ14123 709 aaPredicted RBP20.32■□□□□ 0.84
ABCA3-206ENST00000569062 DPYSL3Q14195 570 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 FZD2Q14332 565 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 CFAP58Q5T655 872 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 TMCO4Q5TGY1 634 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 BRAT1Q6PJG6 821 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 DCP2Q8IU60 420 aaKnown RBP20.32■□□□□ 0.84
ABCA3-206ENST00000569062 ZNF599Q96NL3 588 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 PSKH2Q96QS6 385 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 ATP13A3Q9H7F0 1226 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 MBNL1Q9NR56 388 aaKnown RBP20.32■□□□□ 0.84
ABCA3-206ENST00000569062 DNAJC28Q9NX36 388 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 SEPT3Q9UH03 358 aa20.32■□□□□ 0.84
ABCA3-206ENST00000569062 SPTY2D1-AS1A0A0U1RR47 76 aa20.31■□□□□ 0.84
ABCA3-206ENST00000569062 TRIM38O00635 465 aa20.31■□□□□ 0.84
ABCA3-206ENST00000569062 PIAS2O75928 621 aa20.31■□□□□ 0.84
ABCA3-206ENST00000569062 SERPINB6P35237 376 aa20.31■□□□□ 0.84
ABCA3-206ENST00000569062 BCL2L1Q07817 233 aa20.31■□□□□ 0.84
ABCA3-206ENST00000569062 TBX2Q13207 712 aaPredicted RBP20.31■□□□□ 0.84
ABCA3-206ENST00000569062 DHRS13Q6UX07 377 aa20.31■□□□□ 0.84
ABCA3-206ENST00000569062 TMPRSS7Q7RTY8 843 aa20.31■□□□□ 0.84
ABCA3-206ENST00000569062 MARCH9Q86YJ5 346 aa20.31■□□□□ 0.84
ABCA3-206ENST00000569062 PGBD5Q8N414 524 aa20.31■□□□□ 0.84
ABCA3-206ENST00000569062 ATPAF2Q8N5M1 289 aa20.31■□□□□ 0.84
ABCA3-206ENST00000569062 TP53I13Q8NBR0 393 aaPredicted RBP20.31■□□□□ 0.84
ABCA3-206ENST00000569062 ECHDC3Q96DC8 303 aa20.31■□□□□ 0.84
ABCA3-206ENST00000569062 IFT43Q96FT9 208 aa20.31■□□□□ 0.84
ABCA3-206ENST00000569062 CCDC42Q96M95 316 aa20.31■□□□□ 0.84
ABCA3-206ENST00000569062 RCOR3Q9P2K3 495 aaPredicted RBP20.31■□□□□ 0.84
ABCA3-206ENST00000569062 TMEM110-MUSTN1A8MSY1 372 aa20.3■□□□□ 0.84
ABCA3-206ENST00000569062 TRAFD1O14545 582 aaPredicted RBP20.3■□□□□ 0.84
ABCA3-206ENST00000569062 GIMD1P0DJR0 217 aa20.3■□□□□ 0.84
ABCA3-206ENST00000569062 ACADVLP49748 655 aa20.3■□□□□ 0.84
ABCA3-206ENST00000569062 RENBPP51606 427 aa20.3■□□□□ 0.84
ABCA3-206ENST00000569062 ZNF235Q14590 738 aa20.3■□□□□ 0.84
ABCA3-206ENST00000569062 ERAP2Q6P179 960 aa20.3■□□□□ 0.84
ABCA3-206ENST00000569062 CCNI2Q6ZMN8 369 aaPredicted RBP20.3■□□□□ 0.84
ABCA3-206ENST00000569062 KCTD6Q8NC69 237 aa20.3■□□□□ 0.84
ABCA3-206ENST00000569062 PCDH19Q8TAB3 1148 aa20.3■□□□□ 0.84
ABCA3-206ENST00000569062 SLC35G2Q8TBE7 412 aa20.3■□□□□ 0.84
ABCA3-206ENST00000569062 KLF15Q9UIH9 416 aa20.3■□□□□ 0.84
ABCA3-206ENST00000569062 ATP8A1Q9Y2Q0 1164 aa20.3■□□□□ 0.84
ABCA3-206ENST00000569062 AKR1B15C9JRZ8 316 aaPredicted RBP20.29■□□□□ 0.84
ABCA3-206ENST00000569062 FFAR2O15552 330 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 SIGLEC6O43699 453 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 MFSD11O43934 449 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 MAP3K6O95382 1288 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 CSF2P04141 144 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 C6P13671 934 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 CR2P20023 1033 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 MMP12P39900 470 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 LIG3P49916 1009 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 MAXP61244 160 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 AP1S1P61966 158 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 MESDQ14696 234 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 PROX2Q3B8N5 592 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 ANKRD20A8PQ5CZ79 823 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 NCBP2-AS2Q69YL0 99 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 SARM1Q6SZW1 724 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 PARGQ86W56 976 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 CNGA4Q8IV77 575 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 KDF1Q8NAX2 398 aaPredicted RBP20.29■□□□□ 0.84
ABCA3-206ENST00000569062 TRIM5Q9C035 493 aa20.29■□□□□ 0.84
ABCA3-206ENST00000569062 FAM149AA5PLN7 773 aa20.28■□□□□ 0.84
ABCA3-206ENST00000569062 RFPL3O75679 317 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms