RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 OR1N1Q8NGS0 311 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 OR13C2Q8NGS9 318 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 CLHC1Q8NHS4 586 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 ZNF596Q8TC21 504 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 PPP2R3CQ969Q6 453 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 GAL3ST3Q96A11 431 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 FBXL20Q96IG2 436 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 TPD52L3Q96J77 140 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 FBXL18Q96ME1 805 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 C17orf80Q9BSJ5 609 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 ZDHHC5Q9C0B5 715 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 ABHD16BQ9H3Z7 469 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 AZI2Q9H6S1 392 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 ZFAND3Q9H8U3 227 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 SSU72Q9NP77 194 aaKnown RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 TDP1Q9NUW8 608 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 WHRNQ9P202 907 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 LARSQ9P2J5 1176 aaKnown RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 HEY2Q9UBP5 337 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 PLCL2Q9UPR0 1127 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 ZNF451Q9Y4E5 1061 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 GMEB1Q9Y692 573 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 TRBC2A0A5B9 178 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 TARSL2A2RTX5 802 aaKnown RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 TRIM43BA6NCK2 446 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 TTLL8A6PVC2 850 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 SUPT3HB4E1H0 165 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 KIF28PB7ZC32 967 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 O00370 1275 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 AXIN1O15169 862 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 ZNF208O43345 1280 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 PSIP1O75475 530 aaKnown RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 USP2O75604 605 aaPredicted RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 WFS1O76024 890 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 PDE5AO76074 875 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 PDGFBP01127 241 aaPredicted RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 HLA-DRAP01903 254 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 ANXA2P07355 339 aaKnown RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 UROSP10746 265 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 PEPDP12955 493 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 CYP4B1P13584 511 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 AHCYP23526 432 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 DNASE1P24855 282 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 PRKAR2BP31323 418 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 SOAT1P35610 550 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 ARCN1P48444 511 aaKnown RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 RGS7P49802 495 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 ADARP55265 1226 aaKnown RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 GFRA1P56159 465 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 PDE1BQ01064 536 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 SNX17Q15036 470 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 TMTC4Q5T4D3 741 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 PRAMEF9Q5VWM5 478 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 CES4AQ5XG92 561 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 AFMIDQ63HM1 303 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 CCDC137Q6PK04 289 aaKnown RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 BLOC1S2Q6QNY1 142 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 CATSPERGQ6ZRH7 1159 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 RHOUQ7L0Q8 258 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 KIF18BQ86Y91 864 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 CNGA4Q8IV77 575 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 TMEM192Q8IY95 271 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 CLYBLQ8N0X4 340 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 LINC00528Q8N1L1 170 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 RNF152Q8N8N0 203 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 ZNF610Q8N9Z0 462 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 GLIS1Q8NBF1 620 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 GPR156Q8NFN8 814 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 OR9A1PQ8NGU1 263 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 OR6B3Q8NGW1 331 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 EXD1Q8NHP7 514 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 BRIX1Q8TDN6 353 aaKnown RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 SLC9A6Q92581 669 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 PIGKQ92643 395 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 TRIM43Q96BQ3 446 aaPredicted RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 TSPAN17Q96FV3 270 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 B3GALT6Q96L58 329 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 QRFPRQ96P65 431 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 RAD9AQ99638 391 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 RTKNQ9BST9 563 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 CCDC28BQ9BUN5 200 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 MLPHQ9BV36 600 aaPredicted RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 ADI1Q9BV57 179 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 FRMD8P1Q9BZ68 369 aaPredicted RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 WDR11Q9BZH6 1224 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 MRPL47Q9HD33 250 aaKnown RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 HEYLQ9NQ87 328 aaPredicted RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.11□□□□□ -1.91
CHD9-216ENST00000565803 TMEM160Q9NX00 188 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 RGL1Q9NZL6 768 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 CNIH4Q9P003 139 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 MORF4L1Q9UBU8 362 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 AGO2Q9UKV8 859 aaKnown RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 ROBO3Q96MS0 1386 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 LOC100653049A0A140TA62 436 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 WDR91A4D1P6 747 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 GOLGA6L9A6NEM1 432 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 SLC9B1P1A6NJY1 282 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 C12orf71A8MTZ7 269 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 TTC34A8MYJ7 566 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms