RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 F8W8V4 182 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 KDELR3O43731 214 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 F7P08709 466 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 ATXN1LP0C7T5 689 aaKnown RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 ATP5F1P24539 256 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 ARRB2P32121 409 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 GMPRP36959 345 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 ACVRL1P37023 503 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 ALDH1A3P47895 512 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 GLRBP48167 497 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 KCNQ1P51787 676 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 COPAP53621 1224 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 ACVR1Q04771 509 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 UBAP2LQ14157 1087 aaKnown RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 IKBKEQ14164 716 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 TAF12Q16514 161 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 SEL1L3Q68CR1 1132 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 IL31Q6EBC2 164 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 MRNIPQ6NTE8 343 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 PIWIL4Q7Z3Z4 852 aaKnown RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 MAVSQ7Z434 540 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 SETD3Q86TU7 594 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 RNF168Q8IYW5 571 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 RBM15BQ8NDT2 890 aaKnown RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 OR6P1Q8NGX9 317 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 ZNF461Q8TAF7 563 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 BRSK1Q8TDC3 778 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 STMN2Q93045 179 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 NXNL1Q96CM4 212 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 IGSF21Q96ID5 467 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 GPR78Q96P69 363 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 UNC93B1Q9H1C4 597 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 TRPC7Q9HCX4 862 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 PAK6Q9NQU5 681 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 MRGBPQ9NV56 204 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 HCSTQ9UBK5 93 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 C15orf41Q9Y2V0 281 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 TRIM17Q9Y577 477 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 ZFP37Q9Y6Q3 630 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 ILVBLA1L0T0 632 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 MATN2O00339 956 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 SLC22A2O15244 555 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 TM7SF2O76062 418 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 LTA4HP09960 611 aaKnown RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 NCF2P19878 526 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 ADSLP30566 484 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 NAGLUP54802 743 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 OXCT1P55809 520 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 ZNF177Q13360 481 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 VEPH1Q14D04 833 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 ACAP2Q15057 778 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 TCTN1Q2MV58 587 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 FAM45BPQ6NSW5 357 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 ACAD11Q709F0 780 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 TMC7Q7Z402 723 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 NET1Q7Z628 596 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 CIR1Q86X95 450 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 MFSD6LQ8IWD5 586 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 SCUBE1Q8IWY4 988 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 AFAP1L2Q8N4X5 818 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 GPR150Q8NGU9 434 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 FAM45AQ8TCE6 357 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 BCL7CQ8WUZ0 217 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 TRMT2BQ96GJ1 504 aaKnown RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 SCLYQ96I15 445 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 CNDP1Q96KN2 507 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 TOX2Q96NM4 488 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 PSKH2Q96QS6 385 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 MGME1Q9BQP7 344 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 CINPQ9BW66 212 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 CWH43Q9H720 699 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLPX-204ENST00000559152 UBA2Q9UBT2 640 aaPredicted RBP11.36□□□□□ -0.59
CLPX-204ENST00000559152 OGDHLQ9ULD0 1010 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 VWA7Q9Y334 891 aa11.36□□□□□ -0.59
CLPX-204ENST00000559152 GOLGA8QA0A0J9YX86 632 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 GOLGA8OA6NCC3 632 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 GOLGA8NF8WBI6 632 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 LDB2O43679 373 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 DLX3O60479 287 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 ENTPD5O75356 428 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 ABLIM3O94929 683 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 CRTAMO95727 393 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 NDST3O95803 873 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 GLP2RO95838 553 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 SOD2P04179 222 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 SBK3P0C264 359 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 TPBGLP0DKB5 382 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 CCL23P55773 120 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 USP4Q13107 963 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 TRMT5Q32P41 509 aaKnown RBP11.35□□□□□ -0.59
CLPX-204ENST00000559152 ARL13AQ5H913 290 aaPredicted RBP11.35□□□□□ -0.59
CLPX-204ENST00000559152 HECTD2Q5U5R9 776 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 CNSTQ6PJW8 725 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 PTAR1Q7Z6K3 402 aaPredicted RBP11.35□□□□□ -0.59
CLPX-204ENST00000559152 SDCCAG8Q86SQ7 713 aaPredicted RBP11.35□□□□□ -0.59
CLPX-204ENST00000559152 HDAC10Q969S8 669 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 RSRC1Q96IZ7 334 aaKnown RBP11.35□□□□□ -0.59
CLPX-204ENST00000559152 DEFB118Q96PH6 123 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms