RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 RSPH1Q8WYR4 309 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 IP6K1Q92551 441 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 DPF1Q92782 380 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 P2RX5Q93086 422 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 PPP2R3CQ969Q6 453 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 SLC35B4Q969S0 331 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 SPSB4Q96A44 273 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 GRAMD1AQ96CP6 724 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 MS4A14Q96JA4 679 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 AGAP3Q96P47 875 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 RPS6KC1Q96S38 1066 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 SMC6Q96SB8 1091 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 FMO2Q99518 471 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 NDNQ99608 321 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 POLR3CQ9BUI4 534 aaPredicted RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 SPATA16Q9BXB7 569 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 FSD1LQ9BXM9 530 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 SLC26A6Q9BXS9 759 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 KRTAP17-1Q9BYP8 105 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 ROPN1BQ9BZX4 212 aaPredicted RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 TRIM7Q9C029 511 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 CCSER1Q9C0I3 900 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 LRRC27Q9C0I9 530 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 MIS12Q9H081 205 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 IQCGQ9H095 443 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 STMN4Q9H169 189 aaPredicted RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 DCLRE1BQ9H816 532 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 ROPN1Q9HAT0 212 aaPredicted RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 TRPV5Q9NQA5 729 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 XPNPEP3Q9NQH7 507 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 TXLNGQ9NUQ3 528 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 INTS9Q9NV88 658 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 NMRK1Q9NWW6 199 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 EURLQ9NYK6 297 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 NKX1-2Q9UD57 310 aaPredicted RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 SEC63Q9UGP8 760 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 LNPEPQ9UIQ6 1025 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 ITGB1BP2Q9UKP3 347 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 PNMA2Q9UL42 364 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 GABRQQ9UN88 632 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 WDR37Q9Y2I8 494 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 GDAQ9Y2T3 454 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 ARL2BPQ9Y2Y0 163 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 CDY1Q9Y6F8 540 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.37□□□□□ -1.87
HERC1-203ENST00000558532 FLT1P17948 1338 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 PCDH11XQ9BZA7 1347 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 KIF13AQ9H1H9 1805 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 RTL9Q8NET4 1388 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 TNRQ92752 1358 aa3.37□□□□□ -1.87
HERC1-203ENST00000558532 MAST2Q6P0Q8 1798 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 RBBP6Q7Z6E9 1792 aaKnown RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 RGPD5Q99666 1765 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 MANSC4A6NHS7 340 aaPredicted RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 TARM1B6A8C7 271 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 UBE2Q2LH0YL09 131 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 LAD1O00515 517 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 EPHB6O15197 1021 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 WDR46O15213 610 aaKnown RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 NVLO15381 856 aaKnown RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 MARCH6O60337 910 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 TLR2O60603 784 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 ATP6V1G1O75348 118 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 PALMO75781 387 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 GFPT2O94808 682 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 SHBGP04278 402 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 SERPING1P05155 500 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 NHLRC4P0CG21 123 aaPredicted RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 DESP17661 470 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 ENGP17813 658 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 MUTP22033 750 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 PRKCIP41743 596 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 MATR3P43243 847 aaKnown RBP eCLIP3.36□□□□□ -1.874e-6■■□□□ 11.8
HERC1-203ENST00000558532 PTDSS1P48651 473 aaKnown RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 ALDH9A1P49189 494 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 ACADVLP49748 655 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 KLK7P49862 253 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 CDK7P50613 346 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 POLGP54098 1239 aaPredicted RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 SLC18A1P54219 525 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 RAD23BP54727 409 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 EEFSECP57772 596 aaKnown RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 HAND2P61296 217 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 MRPS21P82921 87 aaKnown RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 LRRC63Q05C16 580 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 FOXF2Q12947 444 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 HNRNPDQ14103 355 aaKnown RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 DHX34Q14147 1143 aaKnown RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 BTG3Q14201 252 aaPredicted RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 HLTFQ14527 1009 aaKnown RBP eCLIP3.36□□□□□ -1.87
HERC1-203ENST00000558532 IL17AQ16552 155 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 CYP1B1Q16678 543 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 CNPY1Q3B7I2 92 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 ZCWPW2Q504Y3 356 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 FAM133BQ5BKY9 247 aaKnown RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 EARS2Q5JPH6 523 aaKnown RBP3.36□□□□□ -1.87
HERC1-203ENST00000558532 SH2D4BQ5SQS7 431 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 SLC9A4Q6AI14 798 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 TMEM154Q6P9G4 183 aa3.36□□□□□ -1.87
HERC1-203ENST00000558532 VSTM1Q6UX27 236 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms