RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 AQP12BA6NM10 295 aa8.82□□□□□ -1
TDP1-204ENST00000545686 ZSCAN9O15535 394 aaPredicted RBP8.82□□□□□ -1
TDP1-204ENST00000545686 IPO13O94829 963 aaKnown RBP8.82□□□□□ -1
TDP1-204ENST00000545686 CSPG5O95196 566 aa8.82□□□□□ -1
TDP1-204ENST00000545686 ZNF286BP0CG31 522 aa8.82□□□□□ -1
TDP1-204ENST00000545686 CPB1P15086 417 aa8.82□□□□□ -1
TDP1-204ENST00000545686 MYF6P23409 242 aa8.82□□□□□ -1
TDP1-204ENST00000545686 AXLP30530 894 aa8.82□□□□□ -1
TDP1-204ENST00000545686 SLC1A2P43004 574 aa8.82□□□□□ -1
TDP1-204ENST00000545686 GALK1P51570 392 aa8.82□□□□□ -1
TDP1-204ENST00000545686 NDST2P52849 883 aa8.82□□□□□ -1
TDP1-204ENST00000545686 TAS2R39P59534 338 aa8.82□□□□□ -1
TDP1-204ENST00000545686 MARCH8Q5T0T0 291 aa8.82□□□□□ -1
TDP1-204ENST00000545686 AGAP9Q5VTM2 703 aa8.82□□□□□ -1
TDP1-204ENST00000545686 HFE2Q6ZVN8 426 aa8.82□□□□□ -1
TDP1-204ENST00000545686 CATSPER4Q7RTX7 472 aa8.82□□□□□ -1
TDP1-204ENST00000545686 OSTM1Q86WC4 334 aa8.82□□□□□ -1
TDP1-204ENST00000545686 AQP12AQ8IXF9 295 aa8.82□□□□□ -1
TDP1-204ENST00000545686 MYO1HQ8N1T3 1032 aa8.82□□□□□ -1
TDP1-204ENST00000545686 PCYOX1LQ8NBM8 494 aa8.82□□□□□ -1
TDP1-204ENST00000545686 GABPB2Q8TAK5 448 aaPredicted RBP8.82□□□□□ -1
TDP1-204ENST00000545686 ZNF420Q8TAQ5 688 aaPredicted RBP8.82□□□□□ -1
TDP1-204ENST00000545686 TRPM4Q8TD43 1214 aa8.82□□□□□ -1
TDP1-204ENST00000545686 ELMO2Q96JJ3 720 aa8.82□□□□□ -1
TDP1-204ENST00000545686 ZNF512Q96ME7 567 aaPredicted RBP8.82□□□□□ -1
TDP1-204ENST00000545686 FCRL5Q96RD9 977 aa8.82□□□□□ -1
TDP1-204ENST00000545686 SLC29A1Q99808 456 aa8.82□□□□□ -1
TDP1-204ENST00000545686 CIB1Q99828 191 aa8.82□□□□□ -1
TDP1-204ENST00000545686 PRKD2Q9BZL6 878 aa8.82□□□□□ -1
TDP1-204ENST00000545686 ADAMTS10Q9H324 1103 aa8.82□□□□□ -1
TDP1-204ENST00000545686 VTA1Q9NP79 307 aa8.82□□□□□ -1
TDP1-204ENST00000545686 ANLNQ9NQW6 1124 aa8.82□□□□□ -1
TDP1-204ENST00000545686 IGSF5Q9NSI5 407 aa8.82□□□□□ -1
TDP1-204ENST00000545686 ZNF510Q9Y2H8 683 aa8.82□□□□□ -1
TDP1-204ENST00000545686 MTF2Q9Y483 593 aaPredicted RBP8.82□□□□□ -1
TDP1-204ENST00000545686 SMIM28A0A1B0GU29 152 aa8.81□□□□□ -1
TDP1-204ENST00000545686 RBM47A0AV96 593 aaKnown RBP8.81□□□□□ -1
TDP1-204ENST00000545686 A8MT66 165 aa8.81□□□□□ -1
TDP1-204ENST00000545686 H3BRB1 525 aa8.81□□□□□ -1
TDP1-204ENST00000545686 I6L893 689 aaPredicted RBP8.81□□□□□ -1
TDP1-204ENST00000545686 CLASP2O75122 1294 aaKnown RBP8.81□□□□□ -1
TDP1-204ENST00000545686 GPC4O75487 556 aa8.81□□□□□ -1
TDP1-204ENST00000545686 JCHAINP01591 159 aa8.81□□□□□ -1
TDP1-204ENST00000545686 RBP1P09455 135 aa8.81□□□□□ -1
TDP1-204ENST00000545686 CCNCP24863 283 aa8.81□□□□□ -1
TDP1-204ENST00000545686 ARNTP27540 789 aa8.81□□□□□ -1
TDP1-204ENST00000545686 LRPAP1P30533 357 aa8.81□□□□□ -1
TDP1-204ENST00000545686 NDUFV1P49821 464 aa8.81□□□□□ -1
TDP1-204ENST00000545686 GEMP55040 296 aa8.81□□□□□ -1
TDP1-204ENST00000545686 NME5P56597 212 aa8.81□□□□□ -1
TDP1-204ENST00000545686 C1QTNF8P60827 252 aa8.81□□□□□ -1
TDP1-204ENST00000545686 ATP6V0D1P61421 351 aa8.81□□□□□ -1
TDP1-204ENST00000545686 RALGDSQ12967 914 aa8.81□□□□□ -1
TDP1-204ENST00000545686 BNIP2Q12982 314 aa8.81□□□□□ -1
TDP1-204ENST00000545686 ZNF460Q14592 562 aa8.81□□□□□ -1
TDP1-204ENST00000545686 SLC14A2Q15849 920 aa8.81□□□□□ -1
TDP1-204ENST00000545686 MAP7D1Q3KQU3 841 aa8.81□□□□□ -1
TDP1-204ENST00000545686 ZNF618Q5T7W0 954 aa8.81□□□□□ -1
TDP1-204ENST00000545686 KLHL35Q6PF15 583 aa8.81□□□□□ -1
TDP1-204ENST00000545686 DCLRE1AQ6PJP8 1040 aa8.81□□□□□ -1
TDP1-204ENST00000545686 PAQR9Q6ZVX9 377 aa8.81□□□□□ -1
TDP1-204ENST00000545686 GALNT7Q86SF2 657 aa8.81□□□□□ -1
TDP1-204ENST00000545686 CUZD1Q86UP6 607 aa8.81□□□□□ -1
TDP1-204ENST00000545686 GPR180Q86V85 440 aa8.81□□□□□ -1
TDP1-204ENST00000545686 CAMK1DQ8IU85 385 aa8.81□□□□□ -1
TDP1-204ENST00000545686 DENND6AQ8IWF6 608 aa8.81□□□□□ -1
TDP1-204ENST00000545686 SHCBP1Q8NEM2 672 aa8.81□□□□□ -1
TDP1-204ENST00000545686 SLC16A10Q8TF71 515 aa8.81□□□□□ -1
TDP1-204ENST00000545686 ISOC1Q96CN7 298 aa8.81□□□□□ -1
TDP1-204ENST00000545686 TSPAN17Q96FV3 270 aa8.81□□□□□ -1
TDP1-204ENST00000545686 SLC45A3Q96JT2 553 aa8.81□□□□□ -1
TDP1-204ENST00000545686 CAMKK2Q96RR4 588 aa8.81□□□□□ -1
TDP1-204ENST00000545686 ULBP1Q9BZM6 244 aa8.81□□□□□ -1
TDP1-204ENST00000545686 NXF3Q9H4D5 531 aaKnown RBP8.81□□□□□ -1
TDP1-204ENST00000545686 TUT1Q9H6E5 874 aaKnown RBP8.81□□□□□ -1
TDP1-204ENST00000545686 NOL11Q9H8H0 719 aaKnown RBP8.81□□□□□ -1
TDP1-204ENST00000545686 CDHR5Q9HBB8 845 aa8.81□□□□□ -1
TDP1-204ENST00000545686 TXNRD2Q9NNW7 524 aa8.81□□□□□ -1
TDP1-204ENST00000545686 TREX1Q9NSU2 369 aa8.81□□□□□ -1
TDP1-204ENST00000545686 CCM2LQ9NUG4 571 aaPredicted RBP8.81□□□□□ -1
TDP1-204ENST00000545686 FAIMQ9NVQ4 179 aa8.81□□□□□ -1
TDP1-204ENST00000545686 RHBDL2Q9NX52 303 aa8.81□□□□□ -1
TDP1-204ENST00000545686 CCDC167Q9P0B6 97 aa8.81□□□□□ -1
TDP1-204ENST00000545686 ABCD2Q9UBJ2 740 aa8.81□□□□□ -1
TDP1-204ENST00000545686 FAF1Q9UNN5 650 aaPredicted RBP8.81□□□□□ -1
TDP1-204ENST00000545686 NRP1O14786 923 aa8.81□□□□□ -1
TDP1-204ENST00000545686 BEST1O76090 585 aa8.81□□□□□ -1
TDP1-204ENST00000545686 HOXD8P13378 290 aaPredicted RBP8.81□□□□□ -1
TDP1-204ENST00000545686 FGFR3P22607 806 aa8.81□□□□□ -1
TDP1-204ENST00000545686 CYP2C18P33260 490 aa8.81□□□□□ -1
TDP1-204ENST00000545686 CXCR3P49682 368 aa8.81□□□□□ -1
TDP1-204ENST00000545686 CLCN5P51795 746 aa8.81□□□□□ -1
TDP1-204ENST00000545686 STX1BP61266 288 aa8.81□□□□□ -1
TDP1-204ENST00000545686 SFSWAPQ12872 951 aaKnown RBP8.81□□□□□ -1
TDP1-204ENST00000545686 ILF2Q12905 390 aaKnown RBP8.81□□□□□ -1
TDP1-204ENST00000545686 CTBP1Q13363 440 aa8.81□□□□□ -1
TDP1-204ENST00000545686 TMED1Q13445 227 aa8.81□□□□□ -1
TDP1-204ENST00000545686 INPP5AQ14642 412 aa8.81□□□□□ -1
TDP1-204ENST00000545686 ACBD5Q5T8D3 534 aaPredicted RBP8.81□□□□□ -1
TDP1-204ENST00000545686 PM20D1Q6GTS8 502 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms