RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 CLDN2P57739 230 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 AP1S1P61966 158 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 DYNLT1P63172 113 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 HNRNPDQ14103 355 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 IHHQ14623 411 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 ZNF423Q2M1K9 1284 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 PPM1JQ5JR12 505 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 IL27RAQ6UWB1 636 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 SPOCD1Q6ZMY3 1216 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 PIP4P1Q86T03 277 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 SPATS2Q86XZ4 545 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 KATNAL2Q8IYT4 538 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 LRRC57Q8N9N7 239 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 MFSD2AQ8NA29 543 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 NSMCE1Q8WV22 266 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 FATE1Q969F0 183 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 HDAC11Q96DB2 347 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 MAK16Q9BXY0 300 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 PCDH12Q9NPG4 1184 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 GRID2IPA4D2P6 1211 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 MMP20O60882 483 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 HNRNPA2B1P22626 353 aaKnown RBP18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 NAP1L1P55209 391 aaKnown RBP18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 GSDMDP57764 484 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 NXPH1P58417 271 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 STAT4Q14765 748 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 TIGD7Q6NT04 549 aaPredicted RBP18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 BRAT1Q6PJG6 821 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 KDM7AQ6ZMT4 941 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 GCNT7Q6ZNI0 430 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 B4GALNT4Q76KP1 1039 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 CCNYQ8ND76 341 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 DEFB124Q8NES8 71 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 BMFQ96LC9 184 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 CAMK1GQ96NX5 476 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 OLFM3Q96PB7 478 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 KLF6Q99612 283 aaPredicted RBP18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 WRAP53Q9BUR4 548 aaKnown RBP18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 SCUBE2Q9NQ36 999 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 TM7SF3Q9NS93 570 aa18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 SAE1Q9UBE0 346 aaPredicted RBP18.45■□□□□ 0.54
SNRPA1-203ENST00000540017 MACROD2A1Z1Q3 448 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 POM121BA6NF01 834 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 GOLGA6L6A8MZA4 724 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 RIOK3O14730 519 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 HTRA2O43464 458 aaPredicted RBP18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 ZRANB2O95218 330 aaKnown RBP eCLIP18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 KCNK5O95279 499 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 CCNB1P14635 433 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 MX2P20592 715 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 XPAP23025 273 aaPredicted RBP18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 AKT2P31751 481 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 CTNNA1P35221 906 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 PPIDQ08752 370 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 TRAF2Q12933 501 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 SLC14A1Q13336 389 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 SHBQ15464 509 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 TMEM52BQ4KMG9 183 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 ODF2Q5BJF6 829 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 KAZNQ674X7 775 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 ERMP1Q7Z2K6 904 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 CCDC13Q8IYE1 715 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 RCOR2Q8IZ40 523 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 BBS5Q8N3I7 341 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 KIAA1524Q8TCG1 905 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 SEMA3CQ99985 751 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 CAAP1Q9H8G2 361 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 RBM22Q9NW64 420 aaKnown RBP eCLIP18.44■□□□□ 0.543e-9■■■■■ 38.6
SNRPA1-203ENST00000540017 ADGRG1Q9Y653 693 aa18.44■□□□□ 0.54
SNRPA1-203ENST00000540017 hCG_1818297A0A087WSY0 165 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 MED19A0JLT2 244 aaPredicted RBP18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 KCNK1O00180 336 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 SH3BP5O60239 455 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 CST8O60676 142 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 HLA-DQB2P05538 268 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 ZNF883P0CG24 379 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 PECAM1P16284 738 aaPredicted RBP18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 ZFXP17010 805 aaPredicted RBP18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 CSRP1P21291 193 aaKnown RBP18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 KCNA4P22459 653 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 MMP12P39900 470 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 SUOXP51687 545 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 IL9RQ01113 521 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 DSC2Q02487 901 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 NIPAL4Q0D2K0 466 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 ZBTB17Q13105 803 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 SGCGQ13326 291 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 SLC45A4Q5BKX6 768 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 TFDP3Q5H9I0 405 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 CFAP58Q5T655 872 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 ALG1LQ6GMV1 187 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 PSAPL1Q6NUJ1 521 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 ABI3BPQ7Z7G0 1075 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 IQCHQ86VS3 1027 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 OR13H1Q8NG92 308 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 EXD1Q8NHP7 514 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 CXorf40AQ8TE69 158 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms