RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 PERM1Q5SV97 790 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 FAXCQ5TGI0 409 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 ACAD10Q6JQN1 1059 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 APTXQ7Z2E3 356 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 GPR155Q7Z3F1 870 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 DNAAF5Q86Y56 855 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 SLC35F3Q8IY50 421 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 MCOLN2Q8IZK6 566 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 LSMEM2Q8N112 164 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 CELF6Q96J87 481 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 HIC2Q96JB3 615 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 TBATAQ96M53 351 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 BOCQ9BWV1 1114 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 CPEB1Q9BZB8 566 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 SLC13A1Q9BZW2 595 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 HSD3B7Q9H2F3 369 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 LRRC19Q9H756 370 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 TAS2R14Q9NYV8 317 aa11.66□□□□□ -0.54
HMGCS1-204ENST00000507293 TSPAN11A1L157 253 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 LMO7DNF2Z398 122 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 J3KR12 359 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 TOR1BO14657 336 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 RIOK3O14730 519 aaKnown RBP11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 CASC3O15234 703 aaKnown RBP11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 ATMINO43313 823 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 PRAMEF11O60813 436 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 CELA2BP08218 269 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 C6P13671 934 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 TSHRP16473 764 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 RPIAP49247 311 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 SUOXP51687 545 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 PPARDQ03181 441 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 NCAPHQ15003 741 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 LRRC14Q15048 493 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 WSCD2Q2TBF2 565 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 CFAP58Q5T655 872 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 RBM44Q6ZP01 1051 aaKnown RBP11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 SLC39A7Q92504 469 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 GLMNQ92990 594 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 NAT6Q93015 286 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 ATXN7L3BQ96GX2 97 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 GBP4Q96PP9 640 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 CLPBQ9H078 707 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 SUV39H2Q9H5I1 410 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 SYNDIG1Q9H7V2 258 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 PCDH12Q9NPG4 1184 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 ASCL3Q9NQ33 180 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 AP4E1Q9UPM8 1137 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 SATB2Q9UPW6 733 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 ENTPD2Q9Y5L3 495 aa11.65□□□□□ -0.54
HMGCS1-204ENST00000507293 A0A1W2PNU3 283 aaPredicted RBP11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 LRRC10BA6NIK2 292 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 TMCO5BA8MYB1 307 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 EEF2KO00418 725 aaKnown RBP11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 YY2O15391 372 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 PRKCGP05129 697 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 CCDC172P0C7W6 258 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 ATP1A3P13637 1013 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 TNFAIP3P21580 790 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 PSMA2P25787 234 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 HTR7P34969 479 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 ANP32AP39687 249 aaKnown RBP11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 RGRP47804 291 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 NDST2P52849 883 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 ERVPABLB-1P60509 514 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 GRM3Q14832 879 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 NFATC4Q14934 902 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 TCEA2Q15560 299 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 CA9Q16790 459 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 UGP2Q16851 508 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 ALG11Q2TAA5 492 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 ERAP2Q6P179 960 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 NYAP1Q6ZVC0 841 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 IRF2BP2Q7Z5L9 587 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 ZSWIM9Q86XI8 627 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 CAMK1DQ8IU85 385 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 HID1Q8IV36 788 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 AOPEPQ8N6M6 819 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 PCDH19Q8TAB3 1148 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 HCAR2Q8TDS4 363 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 KCNE4Q8WWG9 221 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 TSACCQ96A04 125 aaPredicted RBP11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 VCPIP1Q96JH7 1222 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 PEBP4Q96S96 227 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 SYT11Q9BT88 431 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 SNRNP25Q9BV90 132 aaKnown RBP11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 SLC39A8Q9C0K1 460 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 DHX35Q9H5Z1 703 aaKnown RBP11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 THSD1Q9NS62 852 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 SIRPGQ9P1W8 387 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 DOLKQ9UPQ8 538 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 ATP8A1Q9Y2Q0 1164 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 LAMA5O15230 3695 aa11.64□□□□□ -0.55
HMGCS1-204ENST00000507293 SCN8AQ9UQD0 1980 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 TEX51A0A1B0GUA7 166 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 PMS2P1A4D2B8 440 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 ARHGAP42A6NI28 874 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 TMEM110-MUSTN1A8MSY1 372 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 TK2O00142 265 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms