RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-218	ENST00000496197	FBRS	Q9HAH7	460 aa		13.61	□□□□□ -0.23
PTPN7-218	ENST00000496197	USP36	Q9P275	1121 aa	Known RBP	13.61	□□□□□ -0.23
PTPN7-218	ENST00000496197	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
PTPN7-218	ENST00000496197	FAM153A	Q9UHL3	310 aa		13.61	□□□□□ -0.23
PTPN7-218	ENST00000496197	GGT7	Q9UJ14	662 aa		13.61	□□□□□ -0.23
PTPN7-218	ENST00000496197	ITM2B	Q9Y287	266 aa		13.61	□□□□□ -0.23
PTPN7-218	ENST00000496197	PCDHB9	Q9Y5E1	797 aa		13.61	□□□□□ -0.23
PTPN7-218	ENST00000496197	WDFY4	Q6ZS81	3184 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	LOC285095	A0A1B0GVY8	99 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	C16orf96	A6NNT2	1141 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	C1QTNF3-AMACR	E9PGA6	284 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	TP73	O15350	636 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	RNASEH1	O60930	286 aa	Known RBP	13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	SOCS5	O75159	536 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	ZNF189	O75820	626 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	APBB3	O95704	486 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	GAS8	O95995	478 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	ADH1B	P00325	375 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	ATXN1L	P0C7T5	689 aa	Known RBP	13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	TIMP2	P16035	220 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	C5AR1	P21730	350 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	CES1	P23141	567 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	MAPK8	P45983	427 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	TPMT	P51580	245 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	TAS2R38	P59533	333 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	SLC7A5	Q01650	507 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	MPP3	Q13368	585 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	PPP1R7	Q15435	360 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	TRADD	Q15628	312 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	SLC14A2	Q15849	920 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	DSG4	Q86SJ6	1040 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	PGBD3	Q8N328	593 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	HDDC3	Q8N4P3	179 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	FAM160A2	Q8N612	972 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	CEP112	Q8N8E3	955 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	CPT1B	Q92523	772 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	ZNF641	Q96N77	438 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	FICD	Q9BVA6	458 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	OSBPL1A	Q9BXW6	950 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	TRIM31	Q9BZY9	425 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	NEUROG2	Q9H2A3	272 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	PIH1D1	Q9NWS0	290 aa	Known RBP	13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	PLXNA2	O75051	1894 aa		13.6	□□□□□ -0.23
PTPN7-218	ENST00000496197	FANCM	Q8IYD8	2048 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	LAMTOR5	O43504	91 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	RNASEH2A	O75792	299 aa	Known RBP	13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	TMEM63A	O94886	807 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	AP2A1	O95782	977 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	CP	P00450	1065 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	DNTT	P04053	509 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	ALPI	P09923	528 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	ADRB3	P13945	408 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	CTPS1	P17812	591 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	ACTN2	P35609	894 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	FDFT1	P37268	417 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	GEM	P55040	296 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	CSTF1	Q05048	431 aa	Known RBP	13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	CDK18	Q07002	472 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	KCNJ11	Q14654	390 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	GRM3	Q14832	879 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	DENND5A	Q6IQ26	1287 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	ZNF534	Q76KX8	674 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	FAM124A	Q86V42	546 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	CAMKK1	Q8N5S9	505 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	MNS1	Q8NEH6	495 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	LPCAT1	Q8NF37	534 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	RUNDC3B	Q96NL0	473 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	ITM2C	Q9NQX7	267 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	VPS45	Q9NRW7	570 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	HAUS2	Q9NVX0	235 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	FBXL12	Q9NXK8	326 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	DKK3	Q9UBP4	350 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	ASIC3	Q9UHC3	531 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	DMGDH	Q9UI17	866 aa	Known RBP	13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	CYP8B1	Q9UNU6	501 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	INVS	Q9Y283	1065 aa		13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.59	□□□□□ -0.23
PTPN7-218	ENST00000496197	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.58	□□□□□ -0.23
PTPN7-218	ENST00000496197	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	ANXA9	O76027	345 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	APRT	P07741	180 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	PIRT	P0C851	137 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	ACSL1	P33121	698 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	RPL21	P46778	160 aa	Known RBP	13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	FNTB	P49356	437 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	MTM1	Q13496	603 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	SLC1A5	Q15758	541 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	QPCT	Q16769	361 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	UGP2	Q16851	508 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	SIRPB2	Q5JXA9	342 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	ARMC12	Q5T9G4	340 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	FAM46C	Q5VWP2	391 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	C8orf74	Q6P047	294 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	RANBP10	Q6VN20	620 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	ERN2	Q76MJ5	926 aa	Known RBP	13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	SLC25A41	Q8N5S1	370 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms