RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 DEUP1Q05D60 604 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 MORC3Q14149 939 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 TBR1Q16650 682 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 VPS36Q86VN1 386 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 JAMLQ86YT9 394 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 PASD1Q8IV76 773 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 ELOA2Q8IYF1 753 aaPredicted RBP8.3□□□□□ -1.08
USP39-216ENST00000490193 GPR156Q8NFN8 814 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 OR2AP1Q8NGE2 309 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 PCDH19Q8TAB3 1148 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 ARHGEF2Q92974 986 aaKnown RBP8.3□□□□□ -1.08
USP39-216ENST00000490193 TBCBQ99426 244 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 FUCA2Q9BTY2 467 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 CPEB1Q9BZB8 566 aaKnown RBP8.3□□□□□ -1.08
USP39-216ENST00000490193 EDEM3Q9BZQ6 932 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 FOXP3Q9BZS1 431 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 TM6SF2Q9BZW4 377 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 SLC25A18Q9H1K4 315 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 ADNPQ9H2P0 1102 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 LRRN3Q9H3W5 708 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 SYNDIG1Q9H7V2 258 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 MBNL1Q9NR56 388 aaKnown RBP8.3□□□□□ -1.08
USP39-216ENST00000490193 TMPRSS4Q9NRS4 437 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 GEMIN8Q9NWZ8 242 aaKnown RBP8.3□□□□□ -1.08
USP39-216ENST00000490193 APEX2Q9UBZ4 518 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 PISDQ9UG56 409 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 HOOK1Q9UJC3 728 aaKnown RBP8.3□□□□□ -1.08
USP39-216ENST00000490193 APPL1Q9UKG1 709 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 ANKRD36A6QL64 1941 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 SDK2Q58EX2 2172 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 PRAMEF33A0A0G2JMD5 474 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 CLEC18AA5D8T8 446 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 PRAMEF10O60809 474 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 TM7SF2O76062 418 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 RASGRP1O95267 797 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 POP4O95707 220 aaKnown RBP8.29□□□□□ -1.08
USP39-216ENST00000490193 UGT2B4P06133 528 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 WT1P19544 449 aaPredicted RBP8.29□□□□□ -1.08
USP39-216ENST00000490193 BMP6P22004 513 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 GKP32189 559 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 MAPKAPK2P49137 400 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 SUOXP51687 545 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 SNRPD1P62314 119 aaKnown RBP8.29□□□□□ -1.08
USP39-216ENST00000490193 TLE1Q04724 770 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 PTK2Q05397 1052 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 POLD3Q15054 466 aaPredicted RBP8.29□□□□□ -1.08
USP39-216ENST00000490193 AGERQ15109 404 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 ALG11Q2TAA5 492 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 MANEAQ5SRI9 462 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 MANEALQ5VSG8 457 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 GJB7Q6PEY0 223 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 OGFOD3Q6PK18 319 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 CLEC18BQ6UXF7 455 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 GDPD4Q6W3E5 623 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 ARCQ7LC44 396 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 GKN2Q86XP6 184 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 CCNJLQ8IV13 435 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 SLITRK4Q8IW52 837 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 ZSCAN1Q8NBB4 408 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 CLEC18CQ8NCF0 446 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 OR6K2Q8NGY2 324 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 NELFBQ8WX92 580 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 HTR3CQ8WXA8 447 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 KLHL32Q96NJ5 620 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 RBM15Q96T37 977 aaKnown RBP eCLIP8.29□□□□□ -1.08
USP39-216ENST00000490193 SYNCQ9H7C4 482 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 GDPD2Q9HCC8 539 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 ANKMY1Q9P2S6 941 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 DKK3Q9UBP4 350 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 GULP1Q9UBP9 304 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 MAN1B1Q9UKM7 699 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 GPR34Q9UPC5 381 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 DOLKQ9UPQ8 538 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 MFHAS1Q9Y4C4 1052 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 LOXL2Q9Y4K0 774 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 ACTL7AQ9Y615 435 aa8.29□□□□□ -1.08
USP39-216ENST00000490193 USP9YO00507 2555 aaPredicted RBP8.29□□□□□ -1.08
USP39-216ENST00000490193 GTPBP10A4D1E9 387 aaKnown RBP8.28□□□□□ -1.08
USP39-216ENST00000490193 C9orf172C9J069 976 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 KRIT1O00522 736 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 MMP20O60882 483 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 SRGAP2O75044 1071 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 CTSEP14091 401 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 GLB1P16278 677 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 SLC9A1P19634 815 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 ITIH1P19827 911 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 CLCN1P35523 988 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 KRT9P35527 623 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 FLT3P36888 993 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 ACVRL1P37023 503 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 USP8P40818 1118 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 ETV5P41161 510 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 NFATC4Q14934 902 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 CLCA4Q14CN2 919 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 LRRC14Q15048 493 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 IRF4Q15306 451 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 ARHGAP44Q17R89 818 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 KLHL40Q2TBA0 621 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 WSCD2Q2TBF2 565 aa8.28□□□□□ -1.08
USP39-216ENST00000490193 MYLK3Q32MK0 819 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms