RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 FEM1CQ96JP0 617 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 SEMA3CQ99985 751 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 ORAI3Q9BRQ5 295 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 HEMGNQ9BXL5 484 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 FRMD8P1Q9BZ68 369 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-212ENST00000489728 NOD2Q9HC29 1040 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 CAPN10Q9HC96 672 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 PARD6AQ9NPB6 346 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 TMEM74BQ9NUR3 256 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 EIF2B4Q9UI10 523 aaKnown RBP11.18□□□□□ -0.62
CPSF7-212ENST00000489728 TRHDEQ9UKU6 1024 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 DNPEPQ9ULA0 475 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 SLC6A14Q9UN76 642 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 PACSIN2Q9UNF0 486 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-212ENST00000489728 RPL26L1Q9UNX3 145 aaKnown RBP11.18□□□□□ -0.62
CPSF7-212ENST00000489728 NUMA1Q14980 2115 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 RALGAPA1Q6GYQ0 2036 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 ANKRD36A6QL64 1941 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 EP300Q09472 2414 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-212ENST00000489728 PRAMEF26H0Y7S4 382 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 KCNK1O00180 336 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 PLK4O00444 970 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 NEMP1O14524 444 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 SPINT1O43278 529 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 PCDH8O95206 1070 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 SYPP08247 313 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 TIMP2P16035 220 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 ABL2P42684 1182 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 LIMK1P53667 647 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 PPP2CBP62714 309 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 PPP2CAP67775 309 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 ZBTB17Q13105 803 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 ZNF284Q2VY69 593 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 TMEM52BQ4KMG9 183 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 TEX44Q53QW1 395 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 TRIM61Q5EBN2 209 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 IL27RAQ6UWB1 636 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 TTC7BQ86TV6 843 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 CAMK1DQ8IU85 385 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 NDUFAF2Q8N183 169 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 DCLK2Q8N568 766 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 DEFB119Q8N690 84 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 DENND6BQ8NEG7 585 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 ARRDC2Q8TBH0 407 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 ACTL9Q8TC94 416 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 HTR3CQ8WXA8 447 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 SNX19Q92543 992 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 PPP1R2P1Q96PQ5 205 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 LENG8Q96PV6 779 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-212ENST00000489728 C1QTNF7Q9BXJ2 289 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 C1QTNF2Q9BXJ5 285 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 TM9SF3Q9HD45 589 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 SAE1Q9UBE0 346 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-212ENST00000489728 JRKLQ9Y4A0 524 aa11.17□□□□□ -0.62
CPSF7-212ENST00000489728 WDR87Q6ZQQ6 2873 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 PCDH15Q96QU1 1955 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 A0A1W2PQU0 124 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 LNP1A1A4G5 178 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 TOR1BO14657 336 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
CPSF7-212ENST00000489728 VILLO15195 856 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 MAGEC1O60732 1142 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 STK10O94804 968 aaKnown RBP11.16□□□□□ -0.62
CPSF7-212ENST00000489728 PGLSO95336 258 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 CPP00450 1065 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 JCHAINP01591 159 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 HLA-DQB2P05538 268 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 HNRNPA2B1P22626 353 aaKnown RBP11.16□□□□□ -0.62
CPSF7-212ENST00000489728 AKT2P31751 481 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 MMP12P39900 470 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 MAXP61244 160 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 OTUD4Q01804 1114 aaKnown RBP11.16□□□□□ -0.62
CPSF7-212ENST00000489728 AGERQ15109 404 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 ARMC12Q5T9G4 340 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 USP45Q70EL2 814 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 DPPA4Q7L190 304 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 REXO1L1PQ8IX06 675 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 RAVER1Q8IY67 606 aaKnown RBP11.16□□□□□ -0.62
CPSF7-212ENST00000489728 ZCCHC9Q8N567 271 aaKnown RBP11.16□□□□□ -0.62
CPSF7-212ENST00000489728 PAF1Q8N7H5 531 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 CNTD1Q8N815 330 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 CXorf40AQ8TE69 158 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 MAIP1Q8WWC4 291 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 TADA1Q96BN2 335 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 IMP4Q96G21 291 aaKnown RBP11.16□□□□□ -0.62
CPSF7-212ENST00000489728 SERAC1Q96JX3 654 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 TEKT5Q96M29 485 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 MCCC1Q96RQ3 725 aaPredicted RBP11.16□□□□□ -0.62
CPSF7-212ENST00000489728 TDRD1Q9BXT4 1180 aaKnown RBP11.16□□□□□ -0.62
CPSF7-212ENST00000489728 MIR1-1HGQ9H1L0 117 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 SLC25A51Q9H1U9 297 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 PCDH12Q9NPG4 1184 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 KCTD5Q9NXV2 234 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 PHTF1Q9UMS5 762 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 ZFR2Q9UPR6 939 aaKnown RBP11.16□□□□□ -0.62
CPSF7-212ENST00000489728 ZKSCAN5Q9Y2L8 839 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 PPIL1Q9Y3C6 166 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 CACNA1EQ15878 2313 aa11.16□□□□□ -0.62
CPSF7-212ENST00000489728 ATXN2Q99700 1313 aaKnown RBP11.15□□□□□ -0.62
CPSF7-212ENST00000489728 H7C0C1 242 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms