RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ZNF599Q96NL3 588 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 CEP44Q9C0F1 390 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 EDDM13A0A1B0GTR0 161 aa19.58■□□□□ 0.72
CCM2-216ENST00000488727 PPP1R12AO14974 1030 aaPredicted RBP19.58■□□□□ 0.72
CCM2-216ENST00000488727 CXCL12P48061 93 aa19.58■□□□□ 0.72
CCM2-216ENST00000488727 LBRQ14739 615 aaKnown RBP19.58■□□□□ 0.72
CCM2-216ENST00000488727 PRKD1Q15139 912 aaPredicted RBP19.58■□□□□ 0.72
CCM2-216ENST00000488727 CENPUQ71F23 418 aa19.58■□□□□ 0.72
CCM2-216ENST00000488727 BZW1Q7L1Q6 419 aaKnown RBP19.58■□□□□ 0.72
CCM2-216ENST00000488727 PPIL6Q8IXY8 311 aa19.58■□□□□ 0.72
CCM2-216ENST00000488727 CCDC13Q8IYE1 715 aa19.58■□□□□ 0.72
CCM2-216ENST00000488727 OR2A12Q8NGT7 310 aa19.58■□□□□ 0.72
CCM2-216ENST00000488727 MAML1Q92585 1016 aa19.58■□□□□ 0.72
CCM2-216ENST00000488727 HHIPQ96QV1 700 aa19.58■□□□□ 0.72
CCM2-216ENST00000488727 LRFN3Q9BTN0 628 aa19.58■□□□□ 0.72
CCM2-216ENST00000488727 TM6SF2Q9BZW4 377 aa19.58■□□□□ 0.72
CCM2-216ENST00000488727 LHX3Q9UBR4 397 aa19.58■□□□□ 0.72
CCM2-216ENST00000488727 SUN2Q9UH99 717 aa19.58■□□□□ 0.72
CCM2-216ENST00000488727 SLC8A2Q9UPR5 921 aa19.58■□□□□ 0.72
CCM2-216ENST00000488727 MCF2LO15068 1137 aa19.57■□□□□ 0.72
CCM2-216ENST00000488727 MATN3O15232 486 aa19.57■□□□□ 0.72
CCM2-216ENST00000488727 BNIP3LO60238 219 aa19.57■□□□□ 0.72
CCM2-216ENST00000488727 SYNCRIPO60506 623 aaKnown RBP19.57■□□□□ 0.72
CCM2-216ENST00000488727 CCR3P51677 355 aa19.57■□□□□ 0.72
CCM2-216ENST00000488727 COPAP53621 1224 aa19.57■□□□□ 0.72
CCM2-216ENST00000488727 AP1B1Q10567 949 aa19.57■□□□□ 0.72
CCM2-216ENST00000488727 STARD3Q14849 445 aa19.57■□□□□ 0.72
CCM2-216ENST00000488727 QPCTQ16769 361 aa19.57■□□□□ 0.72
CCM2-216ENST00000488727 TIGD7Q6NT04 549 aaPredicted RBP19.57■□□□□ 0.72
CCM2-216ENST00000488727 C1orf210Q8IVY1 113 aa19.57■□□□□ 0.72
CCM2-216ENST00000488727 MAML2Q8IZL2 1156 aaPredicted RBP19.57■□□□□ 0.72
CCM2-216ENST00000488727 PCDH20Q8N6Y1 951 aaKnown RBP19.57■□□□□ 0.72
CCM2-216ENST00000488727 FATE1Q969F0 183 aa19.57■□□□□ 0.72
CCM2-216ENST00000488727 ISG20Q96AZ6 181 aaKnown RBP19.57■□□□□ 0.72
CCM2-216ENST00000488727 MKRN2Q9H000 416 aaKnown RBP19.57■□□□□ 0.72
CCM2-216ENST00000488727 C10orf88Q9H8K7 445 aa19.57■□□□□ 0.72
CCM2-216ENST00000488727 PRMT8Q9NR22 394 aaPredicted RBP19.57■□□□□ 0.72
CCM2-216ENST00000488727 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.56■□□□□ 0.72
CCM2-216ENST00000488727 TCRBV21S2A2A0A5A6 115 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 K7ESF4 209 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 KCNK1O00180 336 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 MUSKO15146 869 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 KIAA0754O94854 1291 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 PAPSS2O95340 614 aaPredicted RBP19.56■□□□□ 0.72
CCM2-216ENST00000488727 IFNB1P01574 187 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 RGRP47804 291 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 DGKEP52429 567 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 GDF10P55107 478 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 EIF3EP60228 445 aaKnown RBP19.56■□□□□ 0.72
CCM2-216ENST00000488727 RHOAP61586 193 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 ZNF33AQ06730 810 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 RFTN1Q14699 578 aaPredicted RBP19.56■□□□□ 0.72
CCM2-216ENST00000488727 RASA2Q15283 850 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 CCDC38Q502W7 563 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 ATXN7L2Q5T6C5 722 aaPredicted RBP19.56■□□□□ 0.72
CCM2-216ENST00000488727 METTL3Q86U44 580 aaKnown RBP19.56■□□□□ 0.72
CCM2-216ENST00000488727 STK40Q8N2I9 435 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 NAT8LQ8N9F0 302 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 TFB1MQ8WVM0 346 aaKnown RBP19.56■□□□□ 0.72
CCM2-216ENST00000488727 SEC16BQ96JE7 1060 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 EXOC2Q96KP1 924 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 QKIQ96PU8 341 aaKnown RBP eCLIP19.56■□□□□ 0.72
CCM2-216ENST00000488727 BRD8Q9H0E9 1235 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 SLC6A17Q9H1V8 727 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 CTNNAL1Q9UBT7 734 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 WDFY4Q6ZS81 3184 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 CCNB1P14635 433 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 RPL22P35268 128 aaKnown RBP19.56■□□□□ 0.72
CCM2-216ENST00000488727 XRCC4Q13426 336 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 HNRNPDQ14103 355 aaKnown RBP19.56■□□□□ 0.72
CCM2-216ENST00000488727 GKAP1Q5VSY0 366 aaPredicted RBP19.56■□□□□ 0.72
CCM2-216ENST00000488727 TSSK4Q6SA08 328 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 DPY19L3Q6ZPD9 716 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 PGBD5Q8N414 524 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 TEX26Q8N6G2 289 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 CPT1BQ92523 772 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 VOPP1Q96AW1 172 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 PSKH2Q96QS6 385 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 FAM129BQ96TA1 746 aa19.56■□□□□ 0.72
CCM2-216ENST00000488727 POLMQ9NP87 494 aaPredicted RBP19.56■□□□□ 0.72
CCM2-216ENST00000488727 E7ESA3 106 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 RBP3P10745 1247 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 GABRG2P18507 467 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 ZBTB17Q13105 803 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 CBLBQ13191 982 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 SLC45A4Q5BKX6 768 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 CARD16Q5EG05 197 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 MARC1Q5VT66 337 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 CPLX4Q7Z7G2 160 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 CACNA2D3Q8IZS8 1091 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 CHST14Q8NCH0 376 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 TSTD1Q8NFU3 115 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 OR2AP1Q8NGE2 309 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 OR6K2Q8NGY2 324 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 OR2T3Q8NH03 318 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 CINPQ9BW66 212 aaPredicted RBP19.55■□□□□ 0.72
CCM2-216ENST00000488727 FETUBQ9UGM5 382 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 SEPT3Q9UH03 358 aa19.55■□□□□ 0.72
CCM2-216ENST00000488727 ANKRD36A6QL64 1941 aa19.54■□□□□ 0.72
CCM2-216ENST00000488727 TMEM120BA0PK00 339 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms