RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 KCNN4O15554 427 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 PSMD3O43242 534 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 HRO43593 1189 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 AP1G1O43747 822 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 ZNF821O75541 412 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-208ENST00000485618 PCDH8O95206 1070 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 MAP3K6O95382 1288 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 GAS8O95995 478 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 PEX11BO96011 259 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 PECAM1P16284 738 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-208ENST00000485618 CCR5P51681 352 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 ETF1P62495 437 aaKnown RBP8.35□□□□□ -1.07
SF3A1-208ENST00000485618 RPS21P63220 83 aaKnown RBP8.35□□□□□ -1.07
SF3A1-208ENST00000485618 CNTN1Q12860 1018 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 TUBB2AQ13885 445 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 SLC14A2Q15849 920 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 P3H1Q32P28 736 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 AASDHQ4L235 1098 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-208ENST00000485618 KIAA1161Q6NSJ0 714 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 DRICH1Q6PGQ1 229 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-208ENST00000485618 NCEH1Q6PIU2 408 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 NPNTQ6UXI9 565 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 ARHGEF18Q6ZSZ5 1173 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 USP45Q70EL2 814 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 CACUL1Q86Y37 369 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 RGL4Q8IZJ4 473 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 FAM160A2Q8N612 972 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-208ENST00000485618 CCDC89Q8N998 374 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 NETO2Q8NC67 525 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 OR6K2Q8NGY2 324 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 CEP76Q8TAP6 659 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 FAM174AQ8TBP5 190 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 GRK7Q8WTQ7 553 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 PDCD6IPQ8WUM4 868 aaKnown RBP8.35□□□□□ -1.07
SF3A1-208ENST00000485618 RLN3Q8WXF3 142 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 ERLEC1Q96DZ1 483 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 EXOC2Q96KP1 924 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 TEKT5Q96M29 485 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 KLHL32Q96NJ5 620 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 RUNDC3BQ96NL0 473 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 TUBB2BQ9BVA1 445 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 GPR174Q9BXC1 333 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 NEUROG2Q9H2A3 272 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 NOD2Q9HC29 1040 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 GLOD4Q9HC38 313 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 POLR3BQ9NW08 1133 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-208ENST00000485618 WSB2Q9NYS7 404 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-208ENST00000485618 SAE1Q9UBE0 346 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-208ENST00000485618 LHX3Q9UBR4 397 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 RALYQ9UKM9 306 aaKnown RBP8.35□□□□□ -1.07
SF3A1-208ENST00000485618 PHTF1Q9UMS5 762 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 DRG1Q9Y295 367 aaKnown RBP8.35□□□□□ -1.07
SF3A1-208ENST00000485618 ATP8A1Q9Y2Q0 1164 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 PCDHGA5Q9Y5G8 931 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 WASF2Q9Y6W5 498 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 CKAP5Q14008 2032 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 FRYLO94915 3013 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 ANTXRLA6NF34 631 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 C5orf60A6NFR6 353 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 FAM47DPA6NHR8 397 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 METTL12A8MUP2 240 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 MEI4A8MW99 385 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 AP3B1O00203 1094 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 PLRG1O43660 514 aaKnown RBP8.34□□□□□ -1.07
SF3A1-208ENST00000485618 GDF9O60383 454 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 MAGEC1O60732 1142 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 RNGTTO60942 597 aaKnown RBP8.34□□□□□ -1.07
SF3A1-208ENST00000485618 EPOP01588 193 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 ITGAVP06756 1048 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 CYP2A6P11509 494 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-208ENST00000485618 ADRB3P13945 408 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 PTPN3P26045 913 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 CXCR5P32302 372 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 DHPSP49366 369 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-208ENST00000485618 GEMP55040 296 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 KLF1Q13351 362 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-208ENST00000485618 TEAD4Q15561 434 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 UGP2Q16851 508 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 PARP6Q2NL67 630 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 SETMARQ53H47 684 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-208ENST00000485618 LYSMD4Q5XG99 296 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 ALG1LQ6GMV1 187 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 CYP2U1Q7Z449 544 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 TP53INP2Q8IXH6 220 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 AADATQ8N5Z0 425 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 C12orf50Q8NA57 414 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-208ENST00000485618 ATL2Q8NHH9 583 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 ACTRT1Q8TDG2 376 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 CXorf40AQ8TE69 158 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 SPOCK2Q92563 424 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 IMP4Q96G21 291 aaKnown RBP8.34□□□□□ -1.07
SF3A1-208ENST00000485618 ZNF419Q96HQ0 510 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-208ENST00000485618 SPATA13Q96N96 652 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 OSBPL9Q96SU4 736 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 SLC6A17Q9H1V8 727 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 FAM153AQ9UHL3 310 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 RSPH14Q9UHP6 348 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 DMTF1Q9Y222 760 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 INVSQ9Y283 1065 aa8.34□□□□□ -1.07
SF3A1-208ENST00000485618 RAI2Q9Y5P3 530 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms