RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 NETO1Q8TDF5 533 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 TFB1MQ8WVM0 346 aaKnown RBP20.68■□□□□ 0.9
VARS-224ENST00000479051 ALG3Q92685 438 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 VOPP1Q96AW1 172 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 SERAC1Q96JX3 654 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 SEMA3CQ99985 751 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 NOD2Q9HC29 1040 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 AASDHPPTQ9NRN7 309 aa20.68■□□□□ 0.9
VARS-224ENST00000479051 CDV3Q9UKY7 258 aaKnown RBP20.68■□□□□ 0.9
VARS-224ENST00000479051 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.67■□□□□ 0.9
VARS-224ENST00000479051 APOC4-APOC2K7ER74 178 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 KCNK1O00180 336 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 MTSS1O43312 755 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 JCHAINP01591 159 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 APOC2P02655 101 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 TIMP2P16035 220 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 ENGP17813 658 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 CA4P22748 312 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 GRIA4P48058 902 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 UGP2Q16851 508 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 NAPEPLDQ6IQ20 393 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 CXorf40AQ8TE69 158 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 LRRN4Q8WUT4 740 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 ECHDC3Q96DC8 303 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 FERMT1Q9BQL6 677 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 SEPT10Q9P0V9 454 aa20.67■□□□□ 0.9
VARS-224ENST00000479051 PACSIN2Q9UNF0 486 aaPredicted RBP20.67■□□□□ 0.9
VARS-224ENST00000479051 GOLGA6L9A6NEM1 432 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 PRAMEF26H0Y7S4 382 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 ARHGAP33O14559 1287 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 AREL1O15033 823 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 HLA-DQB2P05538 268 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 PECAM1P16284 738 aaPredicted RBP20.66■□□□□ 0.9
VARS-224ENST00000479051 AKT2P31751 481 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 C21orf59P57076 290 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 SGCGQ13326 291 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 IL27RAQ6UWB1 636 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 PDCD6IPQ8WUM4 868 aaKnown RBP20.66■□□□□ 0.9
VARS-224ENST00000479051 HAUS1Q96CS2 278 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 HES6Q96HZ4 224 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 PDLIM2Q96JY6 352 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 SLC6A18Q96N87 628 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 IL12RB2Q99665 862 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 ORAI3Q9BRQ5 295 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 GTPBP2Q9BX10 602 aaKnown RBP20.66■□□□□ 0.9
VARS-224ENST00000479051 TMEM9BQ9NQ34 198 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 SAE1Q9UBE0 346 aaPredicted RBP20.66■□□□□ 0.9
VARS-224ENST00000479051 ATP8A1Q9Y2Q0 1164 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 PI4KAP42356 2102 aa20.66■□□□□ 0.9
VARS-224ENST00000479051 TTC24A2A3L6 582 aaPredicted RBP20.65■□□□□ 0.9
VARS-224ENST00000479051 HACD1B0YJ81 288 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 SLC31A1O15431 190 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 DDX3YO15523 660 aaKnown RBP20.65■□□□□ 0.9
VARS-224ENST00000479051 GJB3O75712 270 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 PYGMP11217 842 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 HNRNPA2B1P22626 353 aaKnown RBP20.65■□□□□ 0.9
VARS-224ENST00000479051 CD38P28907 300 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 CSNK1EP49674 416 aaKnown RBP20.65■□□□□ 0.9
VARS-224ENST00000479051 LIMK1P53667 647 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 ADCY2Q08462 1091 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 XRCC4Q13426 336 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 STAT4Q14765 748 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 PRKD1Q15139 912 aaPredicted RBP20.65■□□□□ 0.9
VARS-224ENST00000479051 ZNF284Q2VY69 593 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 TMEM259Q4ZIN3 620 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 LRRC73Q5JTD7 316 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 ARMC12Q5T9G4 340 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 SEL1L3Q68CR1 1132 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 ALG1LQ6GMV1 187 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 ZC3H18Q86VM9 953 aaKnown RBP20.65■□□□□ 0.9
VARS-224ENST00000479051 NDUFAF2Q8N183 169 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 TRIM58Q8NG06 486 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 C1QTNF7Q9BXJ2 289 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 SLC17A9Q9BYT1 436 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 EBF2Q9HAK2 575 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 PCDH12Q9NPG4 1184 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 ZFR2Q9UPR6 939 aaKnown RBP20.65■□□□□ 0.9
VARS-224ENST00000479051 ITM2BQ9Y287 266 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 PCDHGC4Q9Y5F7 938 aa20.65■□□□□ 0.9
VARS-224ENST00000479051 A0A1B0GVT2 93 aa20.64■□□□□ 0.89
VARS-224ENST00000479051 TRAFD1O14545 582 aaPredicted RBP20.64■□□□□ 0.89
VARS-224ENST00000479051 HTRA2O43464 458 aaPredicted RBP20.64■□□□□ 0.89
VARS-224ENST00000479051 MAGEC1O60732 1142 aa20.64■□□□□ 0.89
VARS-224ENST00000479051 ZNF189O75820 626 aaPredicted RBP20.64■□□□□ 0.89
VARS-224ENST00000479051 CPP00450 1065 aa20.64■□□□□ 0.89
VARS-224ENST00000479051 DSC2Q02487 901 aa20.64■□□□□ 0.89
VARS-224ENST00000479051 GRIK2Q13002 908 aa20.64■□□□□ 0.89
VARS-224ENST00000479051 ZNF211Q13398 564 aaPredicted RBP20.64■□□□□ 0.89
VARS-224ENST00000479051 NOMO1Q15155 1222 aa20.64■□□□□ 0.89
VARS-224ENST00000479051 RPS6KA1Q15418 735 aa20.64■□□□□ 0.89
VARS-224ENST00000479051 TMEM52BQ4KMG9 183 aa20.64■□□□□ 0.89
VARS-224ENST00000479051 SEL1L2Q5TEA6 688 aa20.64■□□□□ 0.89
VARS-224ENST00000479051 STPG1Q5TH74 334 aa20.64■□□□□ 0.89
VARS-224ENST00000479051 SPOCK2Q92563 424 aa20.64■□□□□ 0.89
VARS-224ENST00000479051 KLK6Q92876 244 aa20.64■□□□□ 0.89
VARS-224ENST00000479051 ANKRD36A6QL64 1941 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 IGLON5A6NGN9 336 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 H7C0C1 242 aa20.63■□□□□ 0.89
VARS-224ENST00000479051 RIOK3O14730 519 aaKnown RBP20.63■□□□□ 0.89
VARS-224ENST00000479051 VILLO15195 856 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms