RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 GUCA1BQ9UMX6 200 aa12.56□□□□□ -0.4
APTX-220ENST00000476858 FNDC3AQ9Y2H6 1198 aaKnown RBP12.56□□□□□ -0.4
APTX-220ENST00000476858 PCDHA3Q9Y5H8 950 aa12.56□□□□□ -0.4
APTX-220ENST00000476858 PI4KAP42356 2102 aa12.56□□□□□ -0.4
APTX-220ENST00000476858 ZNF487B1APH4 448 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 F5H423 210 aaPredicted RBP12.55□□□□□ -0.4
APTX-220ENST00000476858 GIPC1O14908 333 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 IPO7O95373 1038 aaKnown RBP12.55□□□□□ -0.4
APTX-220ENST00000476858 PAK4O96013 591 aaPredicted RBP12.55□□□□□ -0.4
APTX-220ENST00000476858 JCHAINP01591 159 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 GM2AP17900 193 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 CSNK1DP48730 415 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 IL9RQ01113 521 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 PPIDQ08752 370 aaKnown RBP12.55□□□□□ -0.4
APTX-220ENST00000476858 KIF5AQ12840 1032 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 RALGDSQ12967 914 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 RFTN1Q14699 578 aaPredicted RBP12.55□□□□□ -0.4
APTX-220ENST00000476858 SHBQ15464 509 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 IFI16Q16666 785 aaKnown RBP12.55□□□□□ -0.4
APTX-220ENST00000476858 KCTD19Q17RG1 926 aaPredicted RBP12.55□□□□□ -0.4
APTX-220ENST00000476858 UAP1L1Q3KQV9 507 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 MARC1Q5VT66 337 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 GCNT7Q6ZNI0 430 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 TTC7BQ86TV6 843 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 CCDC50Q8IVM0 306 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 CCDC13Q8IYE1 715 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 MINDY1Q8N5J2 469 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 CCNYQ8ND76 341 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 HDAC11Q96DB2 347 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 ECHDC3Q96DC8 303 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 PPP1R16AQ96I34 528 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 CAMK1GQ96NX5 476 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 NUDCD1Q96RS6 583 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 KLF6Q99612 283 aaPredicted RBP12.55□□□□□ -0.4
APTX-220ENST00000476858 SEMA3CQ99985 751 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 NUSAP1Q9BXS6 441 aaKnown RBP12.55□□□□□ -0.4
APTX-220ENST00000476858 PREBQ9HCU5 417 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 LUC7LQ9NQ29 371 aaKnown RBP12.55□□□□□ -0.4
APTX-220ENST00000476858 AASDHPPTQ9NRN7 309 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 RBM22Q9NW64 420 aaKnown RBP eCLIP12.55□□□□□ -0.4
APTX-220ENST00000476858 DKK3Q9UBP4 350 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 ANKRD6Q9Y2G4 727 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 TP53BP1Q12888 1972 aaPredicted RBP12.55□□□□□ -0.4
APTX-220ENST00000476858 LRRK1Q38SD2 2015 aa12.55□□□□□ -0.4
APTX-220ENST00000476858 POM121BA6NF01 834 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 UPK3BL1B0FP48 263 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 UPK3BL2E5RIL1 263 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 SLC30A4O14863 429 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 ARHGAP6O43182 974 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 AP1G1O43747 822 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 ZRANB2O95218 330 aaKnown RBP eCLIP12.54□□□□□ -0.4
APTX-220ENST00000476858 CCNB1P14635 433 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 CCNCP24863 283 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 HOXD12P35452 270 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 CTSKP43235 329 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 NSUN2Q08J23 767 aaKnown RBP eCLIP12.54□□□□□ -0.4
APTX-220ENST00000476858 AP1B1Q10567 949 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 PRKD1Q15139 912 aaPredicted RBP12.54□□□□□ -0.4
APTX-220ENST00000476858 UGP2Q16851 508 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 HLA-BQ31612 363 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 TFDP3Q5H9I0 405 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 NAPEPLDQ6IQ20 393 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 RFLNAQ6ZTI6 216 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 ZC3H18Q86VM9 953 aaKnown RBP12.54□□□□□ -0.4
APTX-220ENST00000476858 VSIG1Q86XK7 387 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 RCOR2Q8IZ40 523 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 PELI3Q8N2H9 469 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 GPR161Q8N6U8 529 aaKnown RBP12.54□□□□□ -0.4
APTX-220ENST00000476858 TMEM145Q8NBT3 493 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 EXD1Q8NHP7 514 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 CEP76Q8TAP6 659 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 NETO1Q8TDF5 533 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.54□□□□□ -0.4
APTX-220ENST00000476858 LRIG1Q96JA1 1093 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 BMFQ96LC9 184 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 IL12RB2Q99665 862 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 C1QTNF2Q9BXJ5 285 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 OSBPL1AQ9BXW6 950 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 KDM4CQ9H3R0 1056 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 TMEM9BQ9NQ34 198 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 LZTFL1Q9NQ48 299 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 MBNL1Q9NR56 388 aaKnown RBP12.54□□□□□ -0.4
APTX-220ENST00000476858 SEPT10Q9P0V9 454 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 PNMA8BQ9ULN7 279 aaPredicted RBP12.54□□□□□ -0.4
APTX-220ENST00000476858 ATP8A1Q9Y2Q0 1164 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 TTLL3Q9Y4R7 772 aa12.54□□□□□ -0.4
APTX-220ENST00000476858 RIOK3O14730 519 aaKnown RBP12.53□□□□□ -0.4
APTX-220ENST00000476858 HTRA2O43464 458 aaPredicted RBP12.53□□□□□ -0.4
APTX-220ENST00000476858 PRLP01236 227 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 ALPIP09923 528 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 CD59P13987 128 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 GNSP15586 552 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 CTPS1P17812 591 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 CD68P34810 354 aaPredicted RBP12.53□□□□□ -0.4
APTX-220ENST00000476858 MMP12P39900 470 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 ID4P47928 161 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 GRIA4P48058 902 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 AFF3P51826 1226 aaKnown RBP12.53□□□□□ -0.4
APTX-220ENST00000476858 AP1S1P61966 158 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 RACK1P63244 317 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms