RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 LDOC1O95751 146 aaPredicted RBP15.54■□□□□ 0.08
VARS-219ENST00000461328 KRT1P04264 644 aa15.54■□□□□ 0.08
VARS-219ENST00000461328 RGRP47804 291 aa15.54■□□□□ 0.08
VARS-219ENST00000461328 ARSEP51690 589 aa15.54■□□□□ 0.08
VARS-219ENST00000461328 FGL2Q14314 439 aa15.54■□□□□ 0.08
VARS-219ENST00000461328 ANKRD20A8PQ5CZ79 823 aa15.54■□□□□ 0.08
VARS-219ENST00000461328 Q6ZSR6 202 aa15.54■□□□□ 0.08
VARS-219ENST00000461328 PTAR1Q7Z6K3 402 aaPredicted RBP15.54■□□□□ 0.08
VARS-219ENST00000461328 FAM174AQ8TBP5 190 aa15.54■□□□□ 0.08
VARS-219ENST00000461328 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.54■□□□□ 0.08
VARS-219ENST00000461328 VOPP1Q96AW1 172 aa15.54■□□□□ 0.08
VARS-219ENST00000461328 PANX2Q96RD6 677 aa15.54■□□□□ 0.08
VARS-219ENST00000461328 TUBGCP5Q96RT8 1024 aa15.54■□□□□ 0.08
VARS-219ENST00000461328 SUV39H2Q9H5I1 410 aa15.54■□□□□ 0.08
VARS-219ENST00000461328 DKK3Q9UBP4 350 aa15.54■□□□□ 0.08
VARS-219ENST00000461328 DOCK9Q9BZ29 2069 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 FRYQ5TBA9 3013 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 FAM221BA6H8Z2 402 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 NEBLO76041 1014 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 DKK1O94907 266 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 IL4RP24394 825 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 HSPA9P38646 679 aaKnown RBP15.53■□□□□ 0.08
VARS-219ENST00000461328 MMP13P45452 471 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 SCNN1BP51168 640 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 BCL2L1Q07817 233 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 SLC10A7Q0GE19 358 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 NCBP2-AS2Q69YL0 99 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 ERAP2Q6P179 960 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 KYAT3Q6YP21 454 aaKnown RBP15.53■□□□□ 0.08
VARS-219ENST00000461328 ABI3BPQ7Z7G0 1075 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 CAMK1DQ8IU85 385 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 PCDH19Q8TAB3 1148 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 FAM71BQ8TC56 605 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 ZNF641Q96N77 438 aaPredicted RBP15.53■□□□□ 0.08
VARS-219ENST00000461328 ZNF830Q96NB3 372 aaPredicted RBP15.53■□□□□ 0.08
VARS-219ENST00000461328 WRAP53Q9BUR4 548 aaKnown RBP15.53■□□□□ 0.08
VARS-219ENST00000461328 C1QTNF2Q9BXJ5 285 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 PCDHA13Q9Y5I0 950 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 HS3ST3A1Q9Y663 406 aa15.53■□□□□ 0.08
VARS-219ENST00000461328 POM121BA6NF01 834 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 SOWAHDA6NJG2 315 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 FPGTO14772 594 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 AREL1O15033 823 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 MUSKO15146 869 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 RAD51BO15315 384 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 SPINT1O43278 529 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 MAFKO60675 156 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 MAP3K6O95382 1288 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 TIMP2P16035 220 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 SLC1A1P43005 524 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 CSNK1DP48730 415 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 AP1S1P61966 158 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 ELP6Q0PNE2 266 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 MARC1Q5VT66 337 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 BRAT1Q6PJG6 821 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 DCP2Q8IU60 420 aaKnown RBP15.52■□□□□ 0.08
VARS-219ENST00000461328 TMTC1Q8IUR5 882 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 LRRC49Q8IUZ0 686 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 RHOT1Q8IXI2 618 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 SLC22A18ASQ8N1D0 253 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 GALNT15Q8N3T1 639 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 KDF1Q8NAX2 398 aaPredicted RBP15.52■□□□□ 0.08
VARS-219ENST00000461328 RAPGEF5Q92565 580 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 BMFQ96LC9 184 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 LENG8Q96PV6 779 aaPredicted RBP15.52■□□□□ 0.08
VARS-219ENST00000461328 PSKH2Q96QS6 385 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 C1QTNF7Q9BXJ2 289 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 SCUBE2Q9NQ36 999 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 HYOU1Q9Y4L1 999 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 TTLL3Q9Y4R7 772 aa15.52■□□□□ 0.08
VARS-219ENST00000461328 COL5A1P20908 1838 aaPredicted RBP15.52■□□□□ 0.07
VARS-219ENST00000461328 GOLGA6L6A8MZA4 724 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 BUB1BO60566 1050 aaPredicted RBP15.51■□□□□ 0.07
VARS-219ENST00000461328 MMP20O60882 483 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 ITIH2P19823 946 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 MX2P20592 715 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 COMTP21964 271 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 KDELR1P24390 212 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 GARSP41250 739 aaKnown RBP15.51■□□□□ 0.07
VARS-219ENST00000461328 RABIFP47224 123 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 SUOXP51687 545 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 NSUN2Q08J23 767 aaKnown RBP eCLIP15.51■□□□□ 0.07
VARS-219ENST00000461328 GALNT2Q10471 571 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 DNAJC3Q13217 504 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 PAFAH1B3Q15102 231 aaKnown RBP15.51■□□□□ 0.07
VARS-219ENST00000461328 TIGD7Q6NT04 549 aaPredicted RBP15.51■□□□□ 0.07
VARS-219ENST00000461328 DHRS13Q6UX07 377 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 CCNI2Q6ZMN8 369 aaPredicted RBP15.51■□□□□ 0.07
VARS-219ENST00000461328 TMPRSS7Q7RTY8 843 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 KANSL1Q7Z3B3 1105 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 SPC24Q8NBT2 197 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 DENND6BQ8NEG7 585 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 HCAR2Q8TDS4 363 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 PDCD6IPQ8WUM4 868 aaKnown RBP15.51■□□□□ 0.07
VARS-219ENST00000461328 ASB12Q8WXK4 309 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 ZCCHC14Q8WYQ9 949 aaKnown RBP15.51■□□□□ 0.07
VARS-219ENST00000461328 FAF2Q96CS3 445 aa15.51■□□□□ 0.07
VARS-219ENST00000461328 KLF6Q99612 283 aaPredicted RBP15.51■□□□□ 0.07
VARS-219ENST00000461328 MAK16Q9BXY0 300 aaKnown RBP15.51■□□□□ 0.07
VARS-219ENST00000461328 NT5MQ9NPB1 228 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms