RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 ARMC12Q5T9G4 340 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 SDE2Q6IQ49 451 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 CASC4Q6P4E1 433 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 RANBP10Q6VN20 620 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 ANKMY2Q8IV38 441 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 PLPP6Q8IY26 295 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 UBALD2Q8IYN6 164 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 ZBED8Q8IZ13 594 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 IL17RCQ8NAC3 791 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 TXNDC5Q8NBS9 432 aaKnown RBP14.75□□□□□ -0.05
TNF-208ENST00000449264 RPLP0P6Q8NHW5 317 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.75□□□□□ -0.05
TNF-208ENST00000449264 TRIB3Q96RU7 358 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 FOXP3Q9BZS1 431 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 ARGLU1Q9NWB6 273 aaPredicted RBP14.75□□□□□ -0.05
TNF-208ENST00000449264 SUN2Q9UH99 717 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 LOC285095A0A1B0GVY8 99 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 TRAFD1O14545 582 aaPredicted RBP14.74□□□□□ -0.05
TNF-208ENST00000449264 SYNCRIPO60506 623 aaKnown RBP14.74□□□□□ -0.05
TNF-208ENST00000449264 PGLSO95336 258 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 PRKCGP05129 697 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 FGF1P05230 155 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 HOXB2P14652 356 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 HLA-DPA1P20036 260 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 TARSP26639 723 aaKnown RBP14.74□□□□□ -0.05
TNF-208ENST00000449264 MAGEA3P43357 314 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 ENPP2Q13822 863 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 GRM3Q14832 879 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 STARD3Q14849 445 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 FBXO43Q4G163 708 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 DNAJC21Q5F1R6 531 aaKnown RBP14.74□□□□□ -0.05
TNF-208ENST00000449264 CERCAMQ5T4B2 595 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 DENND5AQ6IQ26 1287 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 EMBQ6PCB8 327 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 FBXO38Q6PIJ6 1188 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 GDPD4Q6W3E5 623 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 TRMT11Q7Z4G4 463 aaKnown RBP14.74□□□□□ -0.05
TNF-208ENST00000449264 MPP5Q8N3R9 675 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 VOPP1Q96AW1 172 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 SHDQ96IW2 340 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 KLHL32Q96NJ5 620 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 ADGRE3Q9BY15 652 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 CPEB1Q9BZB8 566 aaKnown RBP14.74□□□□□ -0.05
TNF-208ENST00000449264 FOXQ1Q9C009 403 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 SUV39H2Q9H5I1 410 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 PRSS16Q9NQE7 514 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 SYBUQ9NX95 663 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 CHMP2BQ9UQN3 213 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 ARIH1Q9Y4X5 557 aaPredicted RBP14.74□□□□□ -0.05
TNF-208ENST00000449264 MAD1L1Q9Y6D9 718 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 KPNA3O00505 521 aaPredicted RBP14.74□□□□□ -0.05
TNF-208ENST00000449264 HTRA2O43464 458 aaPredicted RBP14.74□□□□□ -0.05
TNF-208ENST00000449264 ADAM23O75077 832 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 CPP00450 1065 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 PRLP01236 227 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 IL1BP01584 269 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 PRNPP04156 253 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 PIRTP0C851 137 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 PSMD8P48556 350 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 MRPS21P82921 87 aaKnown RBP14.74□□□□□ -0.05
TNF-208ENST00000449264 SEPT6Q14141 434 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 POU6F1Q14863 301 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 Q6ZS52 159 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 CEP128Q6ZU80 1094 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 TMC3Q7Z5M5 1100 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 AGGF1Q8N302 714 aaeCLIP14.74□□□□□ -0.05
TNF-208ENST00000449264 KCNV2Q8TDN2 545 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 C9orf72Q96LT7 481 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 SMIM14Q96QK8 99 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 TSPYL1Q9H0U9 437 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 LTB4R2Q9NPC1 389 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 BFARQ9NZS9 450 aa14.74□□□□□ -0.05
TNF-208ENST00000449264 MRPS17Q9Y2R5 130 aaKnown RBP14.74□□□□□ -0.05
TNF-208ENST00000449264 BDP1A6H8Y1 2624 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 KANSL1LA0AUZ9 987 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 E7ESA3 106 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 STK25O00506 426 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 FZD6O60353 706 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 EPOP01588 193 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 SLC4A1P02730 911 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 H2AFXP16104 143 aaPredicted RBP14.73□□□□□ -0.05
TNF-208ENST00000449264 CTPS1P17812 591 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 SLC8A1P32418 973 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 ELK3P41970 407 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 SLMAPQ14BN4 828 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 CCDC38Q502W7 563 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 LRRC73Q5JTD7 316 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 KIAA1211LQ6NV74 962 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 CAPN12Q6ZSI9 719 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 DSG4Q86SJ6 1040 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 ZSWIM9Q86XI8 627 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 MMAAQ8IVH4 418 aaKnown RBP14.73□□□□□ -0.05
TNF-208ENST00000449264 FBXO36Q8NEA4 188 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 PIP4K2CQ8TBX8 421 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 BLOC1S5Q8TDH9 187 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 ZNF641Q96N77 438 aaPredicted RBP14.73□□□□□ -0.05
TNF-208ENST00000449264 GABRG3Q99928 467 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 WDR83Q9BRX9 315 aaKnown RBP14.73□□□□□ -0.05
TNF-208ENST00000449264 OSBPL1AQ9BXW6 950 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 SAMD15Q9P1V8 674 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms