RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 ISXQ2M1V0 245 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 TMEM52BQ4KMG9 183 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 MACC1Q6ZN28 852 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 SLC35F3Q8IY50 421 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 ZNF578Q96N58 590 aaPredicted RBP28.57■■■□□ 2.16
CBX4-202ENST00000448310 BOCQ9BWV1 1114 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 CPEB1Q9BZB8 566 aaKnown RBP28.57■■■□□ 2.16
CBX4-202ENST00000448310 SLC13A1Q9BZW2 595 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 CLPBQ9H078 707 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 LRRC19Q9H756 370 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 POLR1BQ9H9Y6 1135 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 PDFQ9HBH1 243 aa28.57■■■□□ 2.16
CBX4-202ENST00000448310 GCN1Q92616 2671 aaKnown RBP28.56■■■□□ 2.16
CBX4-202ENST00000448310 ATMINO43313 823 aaPredicted RBP28.56■■■□□ 2.16
CBX4-202ENST00000448310 CELA2BP08218 269 aaPredicted RBP28.56■■■□□ 2.16
CBX4-202ENST00000448310 LSSP48449 732 aa28.56■■■□□ 2.16
CBX4-202ENST00000448310 PCBP4P57723 403 aaKnown RBP28.56■■■□□ 2.16
CBX4-202ENST00000448310 TCEA2Q15560 299 aa28.56■■■□□ 2.16
CBX4-202ENST00000448310 DNAAF5Q86Y56 855 aa28.56■■■□□ 2.16
CBX4-202ENST00000448310 PRKCGP05129 697 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 ANXA6P08133 673 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 TSHRP16473 764 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 PPARDQ03181 441 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 ELP6Q0PNE2 266 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 CA9Q16790 459 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 C3orf38Q5JPI3 329 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 C6orf132Q5T0Z8 1188 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 NYAP1Q6ZVC0 841 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 IRF2BP2Q7Z5L9 587 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 AOPEPQ8N6M6 819 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 ZNF248Q8NDW4 579 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 HIC2Q96JB3 615 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 SUV39H2Q9H5I1 410 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 PCDH12Q9NPG4 1184 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 AP4E1Q9UPM8 1137 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 SATB2Q9UPW6 733 aa28.55■■■□□ 2.16
CBX4-202ENST00000448310 A0A1W2PNU3 283 aaPredicted RBP28.54■■■□□ 2.16
CBX4-202ENST00000448310 LMO7DNF2Z398 122 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 YY2O15391 372 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 BUB1BO60566 1050 aaPredicted RBP28.54■■■□□ 2.16
CBX4-202ENST00000448310 C6P13671 934 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 TNFAIP3P21580 790 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 PSMA2P25787 234 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 RGRP47804 291 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 CXADRP78310 365 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 LRRC14Q15048 493 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 UGP2Q16851 508 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 WSCD2Q2TBF2 565 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 ZSWIM9Q86XI8 627 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 LSMEM2Q8N112 164 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 ATXN7L3BQ96GX2 97 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 GBP4Q96PP9 640 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 SYT11Q9BT88 431 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 SLC39A8Q9C0K1 460 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 DHX35Q9H5Z1 703 aaKnown RBP28.54■■■□□ 2.16
CBX4-202ENST00000448310 ASCL3Q9NQ33 180 aa28.54■■■□□ 2.16
CBX4-202ENST00000448310 MGAQ8IWI9 3026 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 TSPAN11A1L157 253 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 TEX33O43247 280 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 LZTS3O60299 673 aaPredicted RBP28.53■■■□□ 2.16
CBX4-202ENST00000448310 PRAMEF11O60813 436 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 DXOO77932 396 aaKnown RBP28.53■■■□□ 2.16
CBX4-202ENST00000448310 CCDC172P0C7W6 258 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 DESP17661 470 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 ANP32AP39687 249 aaKnown RBP28.53■■■□□ 2.16
CBX4-202ENST00000448310 MAMLD1Q13495 774 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 GPR155Q7Z3F1 870 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 CAMK1DQ8IU85 385 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 HID1Q8IV36 788 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 SLC39A7Q92504 469 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 GLMNQ92990 594 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 TSACCQ96A04 125 aaPredicted RBP28.53■■■□□ 2.16
CBX4-202ENST00000448310 TBATAQ96M53 351 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 PEBP4Q96S96 227 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 PCSK1NQ9UHG2 260 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 ENTPD2Q9Y5L3 495 aa28.53■■■□□ 2.16
CBX4-202ENST00000448310 EEF2KO00418 725 aaKnown RBP28.52■■■□□ 2.16
CBX4-202ENST00000448310 TOR1BO14657 336 aa28.52■■■□□ 2.16
CBX4-202ENST00000448310 ATXN7O15265 892 aaPredicted RBP28.52■■■□□ 2.16
CBX4-202ENST00000448310 RPIAP49247 311 aa28.52■■■□□ 2.16
CBX4-202ENST00000448310 PAPOLAP51003 745 aaKnown RBP28.52■■■□□ 2.16
CBX4-202ENST00000448310 SUOXP51687 545 aa28.52■■■□□ 2.16
CBX4-202ENST00000448310 NDST2P52849 883 aa28.52■■■□□ 2.16
CBX4-202ENST00000448310 CFAP58Q5T655 872 aa28.52■■■□□ 2.16
CBX4-202ENST00000448310 RBM44Q6ZP01 1051 aaKnown RBP28.52■■■□□ 2.16
CBX4-202ENST00000448310 ARFGAP1Q8N6T3 406 aa28.52■■■□□ 2.16
CBX4-202ENST00000448310 SNRNP25Q9BV90 132 aaKnown RBP28.52■■■□□ 2.16
CBX4-202ENST00000448310 SYNDIG1Q9H7V2 258 aa28.52■■■□□ 2.16
CBX4-202ENST00000448310 PMS2P1A4D2B8 440 aa28.51■■■□□ 2.15
CBX4-202ENST00000448310 RIOK3O14730 519 aaKnown RBP28.51■■■□□ 2.15
CBX4-202ENST00000448310 HTR7P34969 479 aa28.51■■■□□ 2.15
CBX4-202ENST00000448310 LIG3P49916 1009 aa28.51■■■□□ 2.15
CBX4-202ENST00000448310 ALG11Q2TAA5 492 aa28.51■■■□□ 2.15
CBX4-202ENST00000448310 ENPP7Q6UWV6 458 aa28.51■■■□□ 2.15
CBX4-202ENST00000448310 RD3Q7Z3Z2 195 aa28.51■■■□□ 2.15
CBX4-202ENST00000448310 TSEN2Q8NCE0 465 aaKnown RBP28.51■■■□□ 2.15
CBX4-202ENST00000448310 HCAR2Q8TDS4 363 aa28.51■■■□□ 2.15
CBX4-202ENST00000448310 VCPIP1Q96JH7 1222 aa28.51■■■□□ 2.15
CBX4-202ENST00000448310 KCTD15Q96SI1 283 aaPredicted RBP28.51■■■□□ 2.15
CBX4-202ENST00000448310 TRIM7Q9C029 511 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms