RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 A0A1W2PPC4 97 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 A0A1W2PQU0 124 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 UPK3BL1B0FP48 263 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 UPK3BL2E5RIL1 263 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 H7C0C1 242 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 NEMP1O14524 444 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 AREL1O15033 823 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 LATO43561 262 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 TSPAN6O43657 245 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 TGM1P22735 817 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 ATP5OP48047 213 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 UGP2Q16851 508 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 DUOXA1Q1HG43 343 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 LRRC73Q5JTD7 316 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 KIAA1161Q6NSJ0 714 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 PRPF39Q86UA1 669 aaKnown RBP18.75■□□□□ 0.59
DDR1-236ENST00000431373 HORMAD1Q86X24 394 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 ZSWIM9Q86XI8 627 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 ZCCHC9Q8N567 271 aaKnown RBP18.75■□□□□ 0.59
DDR1-236ENST00000431373 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.75■□□□□ 0.59
DDR1-236ENST00000431373 CNTD1Q8N815 330 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 TTC13Q8NBP0 860 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 TLR10Q9BXR5 811 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 CEP41Q9BYV8 373 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 PYCARDQ9ULZ3 195 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 ITM2BQ9Y287 266 aa18.75■□□□□ 0.59
DDR1-236ENST00000431373 A0A1B0GTW7 788 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 A0A1W2PQ67 120 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 PATE3B3GLJ2 98 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 KCNK3O14649 394 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 KHNYNO15037 678 aaKnown RBP18.74■□□□□ 0.59
DDR1-236ENST00000431373 SPINT1O43278 529 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 HTRA2O43464 458 aaPredicted RBP18.74■□□□□ 0.59
DDR1-236ENST00000431373 FOXD2O60548 495 aaPredicted RBP18.74■□□□□ 0.59
DDR1-236ENST00000431373 SERPINF2P08697 491 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 PTPN3P26045 913 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 MAT2AP31153 395 aaKnown RBP18.74■□□□□ 0.59
DDR1-236ENST00000431373 NUDT1P36639 197 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 EIF3EP60228 445 aaKnown RBP18.74■□□□□ 0.59
DDR1-236ENST00000431373 POLR2LP62875 67 aaKnown RBP18.74■□□□□ 0.59
DDR1-236ENST00000431373 NIPAL4Q0D2K0 466 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 ELP6Q0PNE2 266 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 TRAF2Q12933 501 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 KLF1Q13351 362 aaPredicted RBP18.74■□□□□ 0.59
DDR1-236ENST00000431373 SF3A2Q15428 464 aaKnown RBP18.74■□□□□ 0.59
DDR1-236ENST00000431373 SETMARQ53H47 684 aaPredicted RBP18.74■□□□□ 0.59
DDR1-236ENST00000431373 TEX44Q53QW1 395 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 TRIM61Q5EBN2 209 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 ZSCAN30Q86W11 494 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 CDKL3Q8IVW4 592 aaPredicted RBP18.74■□□□□ 0.59
DDR1-236ENST00000431373 C1orf216Q8TAB5 229 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 ARRDC2Q8TBH0 407 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 PDCD6IPQ8WUM4 868 aaKnown RBP18.74■□□□□ 0.59
DDR1-236ENST00000431373 HTR3CQ8WXA8 447 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 FEM1CQ96JP0 617 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 AGAP3Q96P47 875 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 ORAI3Q9BRQ5 295 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 EBF2Q9HAK2 575 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 GGT7Q9UJ14 662 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 ZFR2Q9UPR6 939 aaKnown RBP18.74■□□□□ 0.59
DDR1-236ENST00000431373 DMTF1Q9Y222 760 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 GVINP1Q7Z2Y8 2422 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 CACNA1EQ15878 2313 aa18.74■□□□□ 0.59
DDR1-236ENST00000431373 PRR5-ARHGAP8B1AHC4 643 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 BCAT2O15382 392 aaPredicted RBP18.73■□□□□ 0.59
DDR1-236ENST00000431373 CPP00450 1065 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 CFIP05156 583 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 RBP3P10745 1247 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 HOXD11P31277 338 aaPredicted RBP18.73■□□□□ 0.59
DDR1-236ENST00000431373 RPS21P63220 83 aaKnown RBP18.73■□□□□ 0.59
DDR1-236ENST00000431373 WASHC5Q12768 1159 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 ZNF284Q2VY69 593 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 TMEM259Q4ZIN3 620 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 ZNF569Q5MCW4 686 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 TCEAL6Q6IPX3 200 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 ERAP2Q6P179 960 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 SLC23A3Q6PIS1 610 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 PRR23CQ6ZRP0 262 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 C12orf50Q8NA57 414 aaPredicted RBP18.73■□□□□ 0.59
DDR1-236ENST00000431373 SPOCK2Q92563 424 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 TCEAL3Q969E4 200 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 TEKT5Q96M29 485 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 VAT1Q99536 393 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 FAM118BQ9BPY3 351 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 FERMT1Q9BQL6 677 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 NUSAP1Q9BXS6 441 aaKnown RBP18.73■□□□□ 0.59
DDR1-236ENST00000431373 TM9SF3Q9HD45 589 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 PCDH12Q9NPG4 1184 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 JRKLQ9Y4A0 524 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 RAI2Q9Y5P3 530 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 PCDH15Q96QU1 1955 aa18.73■□□□□ 0.59
DDR1-236ENST00000431373 PTPRZ1P23471 2315 aaPredicted RBP18.73■□□□□ 0.59
DDR1-236ENST00000431373 TCRBV7S2A1N4TA0A589 114 aa18.72■□□□□ 0.59
DDR1-236ENST00000431373 KIF5CO60282 957 aa18.72■□□□□ 0.59
DDR1-236ENST00000431373 PGLSO95336 258 aa18.72■□□□□ 0.59
DDR1-236ENST00000431373 ITIH2P19823 946 aa18.72■□□□□ 0.59
DDR1-236ENST00000431373 CA4P22748 312 aa18.72■□□□□ 0.59
DDR1-236ENST00000431373 MSNP26038 577 aaKnown RBP18.72■□□□□ 0.59
DDR1-236ENST00000431373 RBL1P28749 1068 aa18.72■□□□□ 0.59
DDR1-236ENST00000431373 IHHQ14623 411 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms