RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 H3BM21 787 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 EEF2KO00418 725 aaKnown RBP16.43■□□□□ 0.22
PTPRA-206ENST00000430705 MUSKO15146 869 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 LZTS3O60299 673 aaPredicted RBP16.43■□□□□ 0.22
PTPRA-206ENST00000430705 LRCH4O75427 683 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 TM7SF2O76062 418 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 GP1BAP07359 652 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 TCF4P15884 667 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 MIPP30301 263 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 MMP12P39900 470 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 C1orf61Q13536 156 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 IQCB1Q15051 598 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 ZCCHC8Q6NZY4 707 aaKnown RBP16.43■□□□□ 0.22
PTPRA-206ENST00000430705 MACC1Q6ZN28 852 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 RFX8Q6ZV50 586 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 PHACTR4Q8IZ21 702 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 LMX1AQ8TE12 382 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 CXorf40AQ8TE69 158 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 DUSP23Q9BVJ7 150 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 BOCQ9BWV1 1114 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 PCDH12Q9NPG4 1184 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 AIPL1Q9NZN9 384 aa16.43■□□□□ 0.22
PTPRA-206ENST00000430705 APOBEC3BQ9UH17 382 aaKnown RBP16.43■□□□□ 0.22
PTPRA-206ENST00000430705 GCN1Q92616 2671 aaKnown RBP16.42■□□□□ 0.22
PTPRA-206ENST00000430705 CFAP46Q8IYW2 2715 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 A0A1W2PQC6 194 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 NEMP2A6NFY4 417 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 CCDC172P0C7W6 258 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 C6P13671 934 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 GM2AP17900 193 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 ERCC2P18074 760 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 TGM2P21980 687 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 IL1R2P27930 398 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 ABCG1P45844 678 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 RAD51Q06609 339 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 RALGDSQ12967 914 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 DPYSQ14117 519 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 CDKN3Q16667 212 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 WSCD2Q2TBF2 565 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 HS1BP3Q53T59 392 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 PERM1Q5SV97 790 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 ERMARDQ5T6L9 678 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 CAMK1DQ8IU85 385 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 SLC35F3Q8IY50 421 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 TSEN2Q8NCE0 465 aaKnown RBP16.42■□□□□ 0.22
PTPRA-206ENST00000430705 FNIP1Q8TF40 1166 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 FUBP1Q96AE4 644 aaKnown RBP16.42■□□□□ 0.22
PTPRA-206ENST00000430705 SUV39H2Q9H5I1 410 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 USP29Q9HBJ7 922 aa16.42■□□□□ 0.22
PTPRA-206ENST00000430705 IPO11Q9UI26 975 aaKnown RBP16.42■□□□□ 0.22
PTPRA-206ENST00000430705 ASXL3Q9C0F0 2248 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 RIOK3O14730 519 aaKnown RBP16.41■□□□□ 0.22
PTPRA-206ENST00000430705 CSO75390 466 aaKnown RBP16.41■□□□□ 0.22
PTPRA-206ENST00000430705 FTLP02792 175 aaPredicted RBP16.41■□□□□ 0.22
PTPRA-206ENST00000430705 GZMAP12544 262 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 SKILP12757 684 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 EIF4A3P38919 411 aaKnown RBP16.41■□□□□ 0.22
PTPRA-206ENST00000430705 PDX1P52945 283 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 YPEL5P62699 121 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 UGP2Q16851 508 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 TBC1D25Q3MII6 688 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 PRRT3Q5FWE3 981 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 HGSNATQ68CP4 663 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 EFL1Q7Z2Z2 1120 aaKnown RBP16.41■□□□□ 0.22
PTPRA-206ENST00000430705 HCAR2Q8TDS4 363 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 ZNF653Q96CK0 615 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 ECHDC3Q96DC8 303 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 NCAPGQ9BPX3 1015 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 CWC15Q9P013 229 aaKnown RBP16.41■□□□□ 0.22
PTPRA-206ENST00000430705 CNOT8Q9UFF9 292 aaKnown RBP16.41■□□□□ 0.22
PTPRA-206ENST00000430705 SALL4Q9UJQ4 1053 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 RAI2Q9Y5P3 530 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 PTPRQQ9UMZ3 2332 aa16.41■□□□□ 0.22
PTPRA-206ENST00000430705 PMS2P1A4D2B8 440 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 EME2A4GXA9 379 aaPredicted RBP16.4■□□□□ 0.22
PTPRA-206ENST00000430705 EIF3CLB5ME19 914 aaKnown RBP16.4■□□□□ 0.22
PTPRA-206ENST00000430705 LMO7DNF2Z398 122 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 TPP1O14773 563 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 MPOP05164 745 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 TSHRP16473 764 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 LIG3P49916 1009 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 SUOXP51687 545 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 THOP1P52888 689 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 ADKP55263 362 aaKnown RBP16.4■□□□□ 0.22
PTPRA-206ENST00000430705 ELP6Q0PNE2 266 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 AGERQ15109 404 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 ALG11Q2TAA5 492 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 PPP6R3Q5H9R7 873 aaPredicted RBP16.4■□□□□ 0.22
PTPRA-206ENST00000430705 C6orf132Q5T0Z8 1188 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 TXNRD3NBQ6F5E7 133 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 PPP1R2P3Q6NXS1 205 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 CAVIN1Q6NZI2 390 aaKnown RBP16.4■□□□□ 0.22
PTPRA-206ENST00000430705 CRTC1Q6UUV9 634 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 SRLQ86TD4 932 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 PLA2G15Q8NCC3 412 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 MAPK15Q8TD08 544 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 TBATAQ96M53 351 aa16.4■□□□□ 0.22
PTPRA-206ENST00000430705 EIF3CQ99613 913 aaKnown RBP16.4■□□□□ 0.22
PTPRA-206ENST00000430705 NAT10Q9H0A0 1025 aaKnown RBP16.4■□□□□ 0.22
PTPRA-206ENST00000430705 PRORYQ9H606 182 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms