RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 OVGP1Q12889 678 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ZNF235Q14590 738 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SHBQ15464 509 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 CCDC157Q569K6 752 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TMCO4Q5TGY1 634 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 KDM7AQ6ZMT4 941 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TTC7BQ86TV6 843 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 IQCHQ86VS3 1027 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 OXR1Q8N573 874 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 LZTR1Q8N653 840 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PAF1Q8N7H5 531 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TSEN2Q8NCE0 465 aaKnown RBP9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 OR13H1Q8NG92 308 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PRR7Q8TB68 274 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 BAHD1Q8TBE0 780 aaPredicted RBP9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TSC1Q92574 1164 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 KLHDC7BQ96G42 594 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 FEM1CQ96JP0 617 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 CNTNAP3BQ96NU0 1288 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 WRAP53Q9BUR4 548 aaKnown RBP9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 CALN1Q9BXU9 219 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 CNTNAP3Q9BZ76 1288 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 DKK3Q9UBP4 350 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SEPT3Q9UH03 358 aa9.32□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TTC24A2A3L6 582 aaPredicted RBP9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 A6NNZ2 444 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 AREL1O15033 823 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MUSKO15146 869 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MAP3K6O95382 1288 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PAK4O96013 591 aaPredicted RBP9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PRKCGP05129 697 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ITIH2P19823 946 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SERPINA4P29622 427 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MAN1A1P33908 653 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 IL10RBQ08334 325 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SLC10A7Q0GE19 358 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TBX2Q13207 712 aaPredicted RBP9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SGCGQ13326 291 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 DPYSL3Q14195 570 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MESDQ14696 234 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 RFTN1Q14699 578 aaPredicted RBP9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 LBRQ14739 615 aaKnown RBP9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 KYAT3Q6YP21 454 aaKnown RBP9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ABI3BPQ7Z7G0 1075 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SRLQ86TD4 932 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ZSWIM9Q86XI8 627 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 CAMK1DQ8IU85 385 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PNPLA1Q8N8W4 532 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 KCTD6Q8NC69 237 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 CXorf40AQ8TE69 158 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SAP25Q8TEE9 199 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 RFFLQ8WZ73 363 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TUBGCP5Q96RT8 1024 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 CDC6Q99741 560 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SLC17A9Q9BYT1 436 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 CPEB1Q9BZB8 566 aaKnown RBP9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 RBSNQ9H1K0 784 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ATP13A3Q9H7F0 1226 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ERVMER34-1Q9H9K5 563 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PCDH12Q9NPG4 1184 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 RCOR3Q9P2K3 495 aaPredicted RBP9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 FTSJ1Q9UET6 329 aa9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ASCC3Q8N3C0 2202 aaKnown RBP9.31□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TSPAN11A1L157 253 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 LRRD1A4D1F6 860 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 POM121BA6NF01 834 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 BUB1BO60566 1050 aaPredicted RBP9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MMP20O60882 483 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 KRT7P08729 469 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ATXN1LP0C7T5 689 aaKnown RBP9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TIMP2P16035 220 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 IL4RP24394 825 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SCNN1BP51168 640 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ARSEP51690 589 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MAXP61244 160 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 AP1S1P61966 158 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SKOR1P84550 965 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SEMG2Q02383 582 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 GRM3Q14832 879 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ATP13A4Q4VNC1 1196 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 NCBP2-AS2Q69YL0 99 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ERAP2Q6P179 960 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 BRAT1Q6PJG6 821 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 DBX2Q6ZNG2 339 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 Q6ZSR6 202 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 GLRX5Q86SX6 157 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ZSCAN30Q86W11 494 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SLC22A18ASQ8N1D0 253 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 CHCHD4Q8N4Q1 142 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 EID2Q8N6I1 236 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TC2NQ8N9U0 490 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 DENND6BQ8NEG7 585 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SNIP1Q8TAD8 396 aaKnown RBP9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SLC35G2Q8TBE7 412 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 NSMCE1Q8WV22 266 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MRGPRX2Q96LB1 330 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ZNF641Q96N77 438 aaPredicted RBP9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ZNF599Q96NL3 588 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PSKH2Q96QS6 385 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 KLF6Q99612 283 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms