RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 TMPRSS9Q7Z410 1059 aa14.4□□□□□ -0.1
NFE4-201ENST00000420058 DTX1Q86Y01 620 aa14.4□□□□□ -0.1
NFE4-201ENST00000420058 FSTL5Q8N475 847 aaPredicted RBP14.4□□□□□ -0.1
NFE4-201ENST00000420058 GPR156Q8NFN8 814 aa14.4□□□□□ -0.1
NFE4-201ENST00000420058 GFM1Q96RP9 751 aaKnown RBP14.4□□□□□ -0.1
NFE4-201ENST00000420058 SEMA3CQ99985 751 aa14.4□□□□□ -0.1
NFE4-201ENST00000420058 KLC2Q9H0B6 622 aa14.4□□□□□ -0.1
NFE4-201ENST00000420058 LRRN3Q9H3W5 708 aa14.4□□□□□ -0.1
NFE4-201ENST00000420058 TMEM51Q9NW97 253 aa14.4□□□□□ -0.1
NFE4-201ENST00000420058 TMEM248Q9NWD8 314 aa14.4□□□□□ -0.1
NFE4-201ENST00000420058 OR12D3Q9UGF7 316 aa14.4□□□□□ -0.1
NFE4-201ENST00000420058 DNAI1Q9UI46 699 aa14.4□□□□□ -0.1
NFE4-201ENST00000420058 SPTAN1Q13813 2472 aaKnown RBP14.39□□□□□ -0.11
NFE4-201ENST00000420058 KDELR3O43731 214 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 FAM87AP0C7U9 286 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 RHOQP17081 205 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 ITIH1P19827 911 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 SNRPD1P62314 119 aaKnown RBP14.39□□□□□ -0.11
NFE4-201ENST00000420058 ELOCQ15369 112 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 TBR1Q16650 682 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 TMEM52BQ4KMG9 183 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 OGFOD3Q6PK18 319 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 ZFAND4Q86XD8 727 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 JAMLQ86YT9 394 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 HID1Q8IV36 788 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 EMC1Q8N766 993 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 HTR3CQ8WXA8 447 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 ARHGEF26Q96DR7 871 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 WRAP53Q9BUR4 548 aaKnown RBP14.39□□□□□ -0.11
NFE4-201ENST00000420058 OSBPL1AQ9BXW6 950 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 CPEB1Q9BZB8 566 aaKnown RBP14.39□□□□□ -0.11
NFE4-201ENST00000420058 FAM117AQ9C073 453 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 MAGEH1Q9H213 219 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 SYNDIG1Q9H7V2 258 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 DKK3Q9UBP4 350 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 RWDD2AQ9UIY3 292 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 GPR34Q9UPC5 381 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 COQ6Q9Y2Z9 468 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 MFHAS1Q9Y4C4 1052 aa14.39□□□□□ -0.11
NFE4-201ENST00000420058 SPENQ96T58 3664 aaKnown RBP14.38□□□□□ -0.11
NFE4-201ENST00000420058 C9orf172C9J069 976 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 GOLGA8SH3BPF8 625 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 TMX2-CTNND1H3BSU7 103 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 INSIG1O15503 277 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 GADD45BO75293 160 aaPredicted RBP14.38□□□□□ -0.11
NFE4-201ENST00000420058 LRIG2O94898 1065 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 FGFR1OPO95684 399 aaKnown RBP14.38□□□□□ -0.11
NFE4-201ENST00000420058 LIPCP11150 499 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 MAPKAPK2P49137 400 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 CYP4F2P78329 520 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 ATP11AP98196 1134 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 POLD3Q15054 466 aaPredicted RBP14.38□□□□□ -0.11
NFE4-201ENST00000420058 C15orf59Q2T9L4 293 aaPredicted RBP14.38□□□□□ -0.11
NFE4-201ENST00000420058 CCDC14Q49A88 953 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 VASH2Q86V25 355 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 CREBRFQ8IUR6 639 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 CXorf40AQ8TE69 158 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 APOOQ9BUR5 198 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 NAA15Q9BXJ9 866 aaKnown RBP14.38□□□□□ -0.11
NFE4-201ENST00000420058 TTYH3Q9C0H2 523 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 RETREG1Q9H6L5 497 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 FOXJ2Q9P0K8 574 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 PISDQ9UG56 409 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 APPL1Q9UKG1 709 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 LOXL2Q9Y4K0 774 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 PCDHGA4Q9Y5G9 962 aa14.38□□□□□ -0.11
NFE4-201ENST00000420058 HEMK1Q9Y5R4 338 aaPredicted RBP14.38□□□□□ -0.11
NFE4-201ENST00000420058 ARHGEF17Q96PE2 2063 aaPredicted RBP14.38□□□□□ -0.11
NFE4-201ENST00000420058 LRRK1Q38SD2 2015 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 PRAMEF33A0A0G2JMD5 474 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 TMEM110-MUSTN1A8MSY1 372 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 AGRPO00253 132 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 PRAMEF10O60809 474 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 TMCC1O94876 653 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 RASGRP1O95267 797 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 ALPIP09923 528 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 ETFBP38117 255 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 BLKP51451 505 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 BPIFB4P59827 614 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 SRP54P61011 504 aaKnown RBP14.37□□□□□ -0.11
NFE4-201ENST00000420058 INPP5AQ14642 412 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 NFATC4Q14934 902 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 CLCA4Q14CN2 919 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 LRRC14Q15048 493 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 TAF3Q5VWG9 929 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 RWDD4Q6NW29 188 aaKnown RBP14.37□□□□□ -0.11
NFE4-201ENST00000420058 ENPP7Q6UWV6 458 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 ATG14Q6ZNE5 492 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 RD3Q7Z3Z2 195 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 NOP9Q86U38 636 aaKnown RBP14.37□□□□□ -0.11
NFE4-201ENST00000420058 SLITRK4Q8IW52 837 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 SCG3Q8WXD2 468 aaKnown RBP14.37□□□□□ -0.11
NFE4-201ENST00000420058 CPA5Q8WXQ8 436 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 CENPIQ92674 756 aaPredicted RBP14.37□□□□□ -0.11
NFE4-201ENST00000420058 TMEM74Q96NL1 305 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 RBM15Q96T37 977 aaKnown RBP eCLIP14.37□□□□□ -0.11
NFE4-201ENST00000420058 STRADBQ9C0K7 418 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 OR1A2Q9Y585 309 aa14.37□□□□□ -0.11
NFE4-201ENST00000420058 BUB1BO60566 1050 aaPredicted RBP14.36□□□□□ -0.11
NFE4-201ENST00000420058 RAMP2O60895 175 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms