RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 TAS2R50P59544 299 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 ACSM2AQ08AH3 577 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 LMOD3Q0VAK6 560 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBL3Q12788 808 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 TRAF2Q12933 501 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 THOC5Q13769 683 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZRSR1Q15695 479 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 BAK1Q16611 211 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 KIF19Q2TAC6 998 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 TTC39AQ5SRH9 613 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 LCE3CQ5T5A8 94 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 ASPHD1Q5U4P2 390 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 FAAH2Q6GMR7 532 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 CTR9Q6PD62 1173 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 KYAT3Q6YP21 454 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 MEX3BQ6ZN04 569 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 SLC16A12Q6ZSM3 486 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 LRRC8DQ7L1W4 858 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 HEATR4Q86WZ0 1026 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 LAS2Q8IYD9 372 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 CADM3Q8N126 398 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 ANKRD44Q8N8A2 993 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 ADPRHL1Q8NDY3 354 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 SRFBP1Q8NEF9 429 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 CTCFLQ8NI51 663 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZFPM2Q8WW38 1151 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 RFFLQ8WZ73 363 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 ST8SIA4Q92187 359 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 HDAC2Q92769 488 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 ARRDC3Q96B67 414 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 KIF1BPQ96EK5 621 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 CLMNQ96JQ2 1002 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 NCAPGQ9BPX3 1015 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 MAP6D1Q9H9H5 199 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 SDF2L1Q9HCN8 221 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 PDE11AQ9HCR9 933 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 PREBQ9HCU5 417 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 MAP3K20Q9NYL2 800 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 RCE1Q9Y256 329 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 DTX4Q9Y2E6 619 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 GDAQ9Y2T3 454 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 COPG1Q9Y678 874 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 SCAF11Q99590 1463 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 EFCAB5A4FU69 1503 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 UGGT2Q9NYU1 1516 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 ARHGEF12Q9NZN5 1544 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 NKTRP30414 1462 aaKnown RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 GRIN2AQ12879 1464 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 PLB1Q6P1J6 1458 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 DHX16O60231 1041 aaKnown RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 GUCY1B2O75343 617 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 SGPL1O95470 568 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBX6O95947 436 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 LCATP04180 440 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 WNT1P04628 370 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 F7P08709 466 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 HNRNPA1P09651 372 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 ACP5P13686 325 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 SLC8A1P32418 973 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 MAN1A1P33908 653 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 AGTR2P50052 363 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 RASSF2P50749 326 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 EIF5P55010 431 aaKnown RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 NCBP1Q09161 790 aaKnown RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 LRRC24Q50LG9 513 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 SLC9C2Q5TAH2 1124 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 WDR78Q5VTH9 848 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 C1orf122Q6ZSJ8 110 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZNF771Q7L3S4 317 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 GPSM1Q86YR5 675 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 EGFL6Q8IUX8 553 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 HSCBQ8IWL3 235 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 TCP11L2Q8N4U5 519 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 RFLNBQ8N5W9 214 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 ENDOVQ8N8Q3 282 aaKnown RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 LINS1Q8NG48 757 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 KIF18AQ8NI77 898 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 GABPB2Q8TAK5 448 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 KIAA1524Q8TCG1 905 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 GPT2Q8TD30 523 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 CLEC4CQ8WTT0 213 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 ADAMTS14Q8WXS8 1223 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 SH3KBP1Q96B97 665 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 RRP36Q96EU6 259 aaKnown RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 MASTLQ96GX5 879 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 RBM17Q96I25 401 aaKnown RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 IGSF21Q96ID5 467 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZNF845Q96IR2 970 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 HERC2P3Q9BVR0 1158 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 AGXT2Q9BYV1 514 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 UBXN6Q9BZV1 441 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 EGLN1Q9GZT9 426 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 PAIP1Q9H074 479 aaKnown RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 TAOK3Q9H2K8 898 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 DDX31Q9H8H2 851 aaKnown RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 UPF2Q9HAU5 1272 aaKnown RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 SPAG4Q9NPE6 437 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 SLC22A11Q9NSA0 550 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 TERF2IPQ9NYB0 399 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 383.2 ms