RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 LCA5Q86VQ0 697 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 CEP97Q8IW35 865 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 CARNMT1Q8N4J0 409 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 PIWIL2Q8TC59 973 aaKnown RBP20.85■□□□□ 0.93
USP39-203ENST00000409470 C1QTNF1Q9BXJ1 281 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 SAR1AQ9NR31 198 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 ARHGEF3Q9NR81 526 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 SSX2IPQ9Y2D8 614 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 KCTD3Q9Y597 815 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 MKI67P46013 3256 aaKnown RBP20.85■□□□□ 0.93
USP39-203ENST00000409470 TGM5O43548 720 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 NDST3O95803 873 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 LATS1O95835 1130 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 CTSAP10619 480 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 COL6A2P12110 1019 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 RGRP47804 291 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 ABCE1P61221 599 aaKnown RBP20.85■□□□□ 0.93
USP39-203ENST00000409470 ELF3P78545 371 aaPredicted RBP20.85■□□□□ 0.93
USP39-203ENST00000409470 GPR65Q8IYL9 337 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 FIBCD1Q8N539 461 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 MFSD1Q9H3U5 465 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 IL21Q9HBE4 155 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 IL23AQ9NPF7 189 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 SCUBE2Q9NQ36 999 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 STK39Q9UEW8 545 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 STOML2Q9UJZ1 356 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 CPQQ9Y646 472 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 TYW5A2RUC4 315 aaKnown RBP20.84■□□□□ 0.93
USP39-203ENST00000409470 AURKAO14965 403 aa20.84■□□□□ 0.93
USP39-203ENST00000409470 INSIG1O15503 277 aa20.84■□□□□ 0.93
USP39-203ENST00000409470 T-ENOLP0DO92 83 aa20.84■□□□□ 0.93
USP39-203ENST00000409470 GABRR2P28476 465 aa20.84■□□□□ 0.93
USP39-203ENST00000409470 GLRBP48167 497 aa20.84■□□□□ 0.93
USP39-203ENST00000409470 ARSDP51689 593 aa20.84■□□□□ 0.93
USP39-203ENST00000409470 TAS2R39P59534 338 aa20.84■□□□□ 0.93
USP39-203ENST00000409470 POU4F1Q01851 419 aa20.84■□□□□ 0.93
USP39-203ENST00000409470 ALYREFQ86V81 257 aaKnown RBP20.84■□□□□ 0.93
USP39-203ENST00000409470 RNF135Q8IUD6 432 aa20.84■□□□□ 0.93
USP39-203ENST00000409470 TMEM237Q96Q45 408 aa20.84■□□□□ 0.93
USP39-203ENST00000409470 ASB3Q9Y575 518 aa20.84■□□□□ 0.93
USP39-203ENST00000409470 ARL5AQ9Y689 179 aa20.84■□□□□ 0.93
USP39-203ENST00000409470 LRG1P02750 347 aa20.83■□□□□ 0.93
USP39-203ENST00000409470 PIRTP0C851 137 aa20.83■□□□□ 0.93
USP39-203ENST00000409470 DNAJB1P25685 340 aa20.83■□□□□ 0.93
USP39-203ENST00000409470 HNRNPH1P31943 449 aaKnown RBP20.83■□□□□ 0.93
USP39-203ENST00000409470 LEPRP48357 1165 aaKnown RBP20.83■□□□□ 0.93
USP39-203ENST00000409470 RASSF2P50749 326 aa20.83■□□□□ 0.93
USP39-203ENST00000409470 CYTH1Q15438 398 aa20.83■□□□□ 0.93
USP39-203ENST00000409470 CTC1Q2NKJ3 1217 aa20.83■□□□□ 0.93
USP39-203ENST00000409470 CILP2Q8IUL8 1156 aa20.83■□□□□ 0.93
USP39-203ENST00000409470 RDH11Q8TC12 318 aa20.83■□□□□ 0.93
USP39-203ENST00000409470 BRSK1Q8TDC3 778 aa20.83■□□□□ 0.93
USP39-203ENST00000409470 MRPS31Q92665 395 aaKnown RBP20.83■□□□□ 0.93
USP39-203ENST00000409470 RILPQ96NA2 401 aa20.83■□□□□ 0.93
USP39-203ENST00000409470 NDNQ99608 321 aa20.83■□□□□ 0.93
USP39-203ENST00000409470 SIKE1Q9BRV8 207 aa20.83■□□□□ 0.93
USP39-203ENST00000409470 KIAA1671Q9BY89 1806 aa20.83■□□□□ 0.93
USP39-203ENST00000409470 KIAA0100Q14667 2235 aaKnown RBP20.83■□□□□ 0.92
USP39-203ENST00000409470 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.83■□□□□ 0.92
USP39-203ENST00000409470 TK2O00142 265 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 FCHO1O14526 889 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 BUD23O43709 281 aaKnown RBP20.83■□□□□ 0.92
USP39-203ENST00000409470 TRIM13O60858 407 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 CLCN5P51795 746 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 CYP4F8P98187 520 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 SLC14A2Q15849 920 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 HSF5Q4G112 596 aaPredicted RBP20.83■□□□□ 0.92
USP39-203ENST00000409470 ZNF789Q5FWF6 425 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 RBM20Q5T481 1227 aaKnown RBP20.83■□□□□ 0.92
USP39-203ENST00000409470 LRRC8EQ6NSJ5 796 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 CENPLQ8N0S6 344 aaPredicted RBP20.83■□□□□ 0.92
USP39-203ENST00000409470 HJURPQ8NCD3 748 aaPredicted RBP20.83■□□□□ 0.92
USP39-203ENST00000409470 RMDN1Q96DB5 314 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 TMA16Q96EY4 203 aaKnown RBP20.83■□□□□ 0.92
USP39-203ENST00000409470 TRIB3Q96RU7 358 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 OMDQ99983 421 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 ZBED2Q9BTP6 218 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 LRMDAQ9H2I8 198 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 PLXNA4Q9HCM2 1894 aa20.83■□□□□ 0.92
USP39-203ENST00000409470 A0A087X1B8 175 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 OR51F1A6NGY5 319 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 H2AFYO75367 372 aaKnown RBP20.82■□□□□ 0.92
USP39-203ENST00000409470 CXCL14O95715 111 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 KRT16P08779 473 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 ZYG11AQ6WRX3 759 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 ZNF783Q6ZMS7 281 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 ADAMTS19Q8TE59 1207 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 PRR11Q96HE9 360 aaPredicted RBP20.82■□□□□ 0.92
USP39-203ENST00000409470 DNAJC1Q96KC8 554 aaKnown RBP20.82■□□□□ 0.92
USP39-203ENST00000409470 TBATAQ96M53 351 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 SORT1Q99523 831 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 TUBB6Q9BUF5 446 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 STK38LQ9Y2H1 464 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 SNAP91O60641 907 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 HSPA4LO95757 839 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 OLFM2O95897 454 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 CKMP06732 381 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 CES1P23141 567 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 ARF5P84085 180 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 ZXDBP98169 803 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms