RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 BST1Q10588 318 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 BNIP1Q12981 228 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC12A1Q13621 1099 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 GRM3Q14832 879 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 CHI3L2Q15782 390 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 FASTKD1Q53R41 847 aaKnown RBP6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 TAF1BQ53T94 588 aaPredicted RBP6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 PPM1JQ5JR12 505 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 RALGPS1Q5JS13 557 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 SIRPB2Q5JXA9 342 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 MPP7Q5T2T1 576 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 RNF219Q5W0B1 726 aaPredicted RBP6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 TXNDC8Q6A555 127 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 C16orf46Q6P387 395 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 SPATA31D4Q6ZUB0 917 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 RAPH1Q70E73 1250 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 C10orf67Q8IYJ2 551 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 MICALL1Q8N3F8 863 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 FITM2Q8N6M3 262 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 MRPL43Q8N983 215 aaKnown RBP6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 C2CD4AQ8NCU7 369 aaPredicted RBP6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 KREMEN2Q8NCW0 462 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 RDH11Q8TC12 318 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 C10orf82Q8WW14 230 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 PRICKLE1Q96MT3 831 aaPredicted RBP6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 GCNAQ96QF7 691 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 MFSD1Q9H3U5 465 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 ZNF334Q9HCZ1 680 aaPredicted RBP6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 NPHS2Q9NP85 383 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 ABCF3Q9NUQ8 709 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 SMPD4Q9NXE4 827 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 TMEM216Q9P0N5 145 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 COPG2Q9UBF2 871 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC12A4Q9UP95 1085 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 ACOT9Q9Y305 439 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 RWDD3Q9Y3V2 267 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 CPQQ9Y646 472 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 CAPN7Q9Y6W3 813 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 PLXNA3P51805 1871 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 TRAV19A0A0A6YYK7 116 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 CCDC78A2IDD5 438 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 CFAP73A6NFT4 308 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 SOBPA7XYQ1 873 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 GOLGA8TH3BQL2 631 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 GFRA2O00451 464 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 MUSKO15146 869 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 LDB2O43679 373 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 GREM1O60565 184 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 TBL1XO60907 577 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 H2AFYO75367 372 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 DNAJC8O75937 253 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 UBOX5O94941 541 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 CRTAMO95727 393 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 C8AP07357 584 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 DLDP09622 509 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 ATXN1LP0C7T5 689 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 LINC00271P0C7V0 271 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 STMN1P16949 149 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 HOXB8P17481 243 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 CR2P20023 1033 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 ARNTP27540 789 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 GABRB3P28472 473 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 LEPRP48357 1165 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 CSRP3P50461 194 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 RASSF2P50749 326 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 SCNN1BP51168 640 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC12A2P55011 1212 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 RAB10P61026 200 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 PRAMEP78395 509 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 OCRLQ01968 901 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 ACVR1Q04771 509 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC20A2Q08357 652 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 CTBP1Q13363 440 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 IHHQ14623 411 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 CYTH1Q15438 398 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 MPPE1Q53F39 396 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 TMEM240Q5SV17 173 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 CXorf57Q6NSI4 855 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 RETSATQ6NUM9 610 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 PSRC1Q6PGN9 363 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 GAREM2Q75VX8 874 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 CMC1Q7Z7K0 106 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 SDCCAG8Q86SQ7 713 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 CLEC14AQ86T13 490 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 METTL3Q86U44 580 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 FAM217AQ8IXS0 508 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 CPXM2Q8N436 756 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 CARNMT1Q8N4J0 409 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 MAB21L3Q8N8X9 362 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 OR52K2Q8NGK3 314 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 OR6P1Q8NGX9 317 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 PPP4R1Q8TF05 950 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 STYXQ8WUJ0 223 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 SCG3Q8WXD2 468 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 USP13Q92995 863 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 HDAC10Q969S8 669 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 WBP2Q969T9 261 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 TSPAN17Q96FV3 270 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms