RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PBXIP1Q96AQ6 731 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 RANBP9Q96S59 729 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 NOD2Q9HC29 1040 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 THG1LQ9NWX6 298 aaKnown RBP21.2■□□□□ 0.98
TPM1-208ENST00000404484 GGA2Q9UJY4 613 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 CLEC4EQ9ULY5 219 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 TCAF1Q9Y4C2 921 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 ACTL7AQ9Y615 435 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 FAM169AQ9Y6X4 670 aa21.2■□□□□ 0.98
TPM1-208ENST00000404484 HEATR9A2RTY3 570 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 NFATC1O95644 943 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 PABPC1P11940 636 aaKnown RBP21.19■□□□□ 0.98
TPM1-208ENST00000404484 HLA-FP30511 346 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 AP1S1P61966 158 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 MGAT5Q09328 741 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 SLC25A41Q8N5S1 370 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 DCAKDQ8WVC6 231 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 RSPRY1Q96DX4 576 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 CERS2Q96G23 380 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 SLC2A4RGQ9NR83 387 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 LHX3Q9UBR4 397 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 SLC25A13Q9UJS0 675 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 ADAM21Q9UKJ8 722 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 HOXC11O43248 304 aaPredicted RBP21.19■□□□□ 0.98
TPM1-208ENST00000404484 NDST3O95803 873 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 KRT15P19012 456 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 PAMP19021 973 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 SERPINB9P50453 376 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 POU6F1Q14863 301 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 DHCR24Q15392 516 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 SIRPB2Q5JXA9 342 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 TRMT10BQ6PF06 316 aaKnown RBP21.19■□□□□ 0.98
TPM1-208ENST00000404484 MARK2Q7KZI7 788 aaKnown RBP21.19■□□□□ 0.98
TPM1-208ENST00000404484 NLRP9Q7RTR0 991 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 KDELC2Q7Z4H8 507 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.19■□□□□ 0.98
TPM1-208ENST00000404484 MRRFQ96E11 262 aaKnown RBP21.19■□□□□ 0.98
TPM1-208ENST00000404484 TRIM56Q9BRZ2 755 aaKnown RBP21.19■□□□□ 0.98
TPM1-208ENST00000404484 PPANQ9NQ55 473 aaKnown RBP21.19■□□□□ 0.98
TPM1-208ENST00000404484 WNT16Q9UBV4 365 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 FBXL21Q9UKT6 434 aa21.19■□□□□ 0.98
TPM1-208ENST00000404484 ADH5P11766 374 aa21.18■□□□□ 0.98
TPM1-208ENST00000404484 CNTFP26441 200 aa21.18■□□□□ 0.98
TPM1-208ENST00000404484 CHRNA4P43681 627 aa21.18■□□□□ 0.98
TPM1-208ENST00000404484 RGRP47804 291 aa21.18■□□□□ 0.98
TPM1-208ENST00000404484 CSNK1DP48730 415 aa21.18■□□□□ 0.98
TPM1-208ENST00000404484 GRM2Q14416 872 aa21.18■□□□□ 0.98
TPM1-208ENST00000404484 PDGFRLQ15198 375 aa21.18■□□□□ 0.98
TPM1-208ENST00000404484 EML3Q32P44 896 aa21.18■□□□□ 0.98
TPM1-208ENST00000404484 VITQ6UXI7 678 aa21.18■□□□□ 0.98
TPM1-208ENST00000404484 ATP2A3Q93084 1043 aa21.18■□□□□ 0.98
TPM1-208ENST00000404484 EXOC2Q96KP1 924 aa21.18■□□□□ 0.98
TPM1-208ENST00000404484 LRRC3BQ96PB8 259 aa21.18■□□□□ 0.98
TPM1-208ENST00000404484 CHRAC1Q9NRG0 131 aa21.18■□□□□ 0.98
TPM1-208ENST00000404484 INTS6Q9UL03 887 aaKnown RBP21.18■□□□□ 0.98
TPM1-208ENST00000404484 TTC24A2A3L6 582 aaPredicted RBP21.17■□□□□ 0.98
TPM1-208ENST00000404484 HEPACAM2A8MVW5 462 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 KRT37O76014 449 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 CYP17A1P05093 508 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 ATXN1LP0C7T5 689 aaKnown RBP21.17■□□□□ 0.98
TPM1-208ENST00000404484 GYS2P54840 703 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 IHHQ14623 411 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 IER5LQ5T953 404 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 SRLQ86TD4 932 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 EXOC3L1Q86VI1 746 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 RASSF3Q86WH2 238 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 CYP4X1Q8N118 509 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 AHI1Q8N157 1196 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 ISG20Q96AZ6 181 aaKnown RBP21.17■□□□□ 0.98
TPM1-208ENST00000404484 TDRD1Q9BXT4 1180 aaKnown RBP21.17■□□□□ 0.98
TPM1-208ENST00000404484 ADGRE3Q9BY15 652 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 NSMCE4AQ9NXX6 385 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 ZFATQ9P243 1243 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 TXNDC16Q9P2K2 825 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 HS3ST2Q9Y278 367 aa21.17■□□□□ 0.98
TPM1-208ENST00000404484 FCF1Q9Y324 198 aaKnown RBP21.17■□□□□ 0.98
TPM1-208ENST00000404484 ZCWPW2A0A1B0GU75 182 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.16■□□□□ 0.98
TPM1-208ENST00000404484 KRBA1A5PL33 1030 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 KRT38O76015 456 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 PAPSS2O95340 614 aaPredicted RBP21.16■□□□□ 0.98
TPM1-208ENST00000404484 IGSF6O95976 241 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 PSMC3P17980 439 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 SEPT6Q14141 434 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 FUT11Q495W5 492 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 PDPK2PQ6A1A2 396 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 NCEH1Q6PIU2 408 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 CES3Q6UWW8 571 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 TRABD2AQ86V40 505 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 MFSD6LQ8IWD5 586 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 SIX5Q8N196 739 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 WFIKKN2Q8TEU8 576 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 MTBPQ96DY7 904 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 FCRL3Q96P31 734 aaPredicted RBP21.16■□□□□ 0.98
TPM1-208ENST00000404484 TRIB3Q96RU7 358 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 TRMT61BQ9BVS5 477 aaKnown RBP21.16■□□□□ 0.98
TPM1-208ENST00000404484 CEP44Q9C0F1 390 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 F5P12259 2224 aa21.16■□□□□ 0.98
TPM1-208ENST00000404484 CXorf49A8MYA2 514 aaPredicted RBP21.15■□□□□ 0.98
TPM1-208ENST00000404484 MT-CO1P00395 513 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms