RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 ZCCHC23Q6ZST2 131 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 CCDC149Q6ZUS6 474 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 HTR3DQ70Z44 454 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 CRLF3Q8IUI8 442 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 CILP2Q8IUL8 1156 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 SLC41A1Q8IVJ1 513 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 CENPLQ8N0S6 344 aaPredicted RBP12.35□□□□□ -0.43
CLIP4-203ENST00000401617 GPR78Q96P69 363 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 NUDCD1Q96RS6 583 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 NMRAL1Q9HBL8 299 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 TLK1Q9UKI8 766 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 A0A0G2JND7 137 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 TARM1B6A8C7 271 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 ITM2AO43736 263 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 TBL1XO60907 577 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 LUC7L3O95232 432 aaKnown RBP12.35□□□□□ -0.43
CLIP4-203ENST00000401617 PRLP01236 227 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 ADH1AP07327 375 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 T-ENOLP0DO92 83 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 MYL2P10916 166 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 SLC1A6P48664 564 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 TAS2R39P59534 338 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 ILF2Q12905 390 aaKnown RBP12.35□□□□□ -0.43
CLIP4-203ENST00000401617 INO80DQ53TQ3 878 aaPredicted RBP12.35□□□□□ -0.43
CLIP4-203ENST00000401617 FSCBQ5H9T9 825 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 FAM91A1Q658Y4 838 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 CEP97Q8IW35 865 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 HS6ST3Q8IZP7 471 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 GPR150Q8NGU9 434 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 RDH11Q8TC12 318 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 MRPS31Q92665 395 aaKnown RBP12.35□□□□□ -0.43
CLIP4-203ENST00000401617 HDAC10Q969S8 669 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 SORT1Q99523 831 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 FEM1AQ9BSK4 669 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 SAR1AQ9NR31 198 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLIP4-203ENST00000401617 HEY2Q9UBP5 337 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 LZTS1Q9Y250 596 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 KCTD3Q9Y597 815 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 E2F8A0AVK6 867 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 ZBBXA8MT70 800 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 H0YHG0 523 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 CBX4O00257 560 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 AURKAO14965 403 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 PHGDHO43175 533 aaKnown RBP12.34□□□□□ -0.43
CLIP4-203ENST00000401617 LRG1P02750 347 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 SBK3P0C264 359 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 RALBP11234 206 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 STMN1P16949 149 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 MZF1P28698 734 aaPredicted RBP12.34□□□□□ -0.43
CLIP4-203ENST00000401617 CLCN5P51795 746 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 TAF1BQ53T94 588 aaPredicted RBP12.34□□□□□ -0.43
CLIP4-203ENST00000401617 TMEM240Q5SV17 173 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 CNSTQ6PJW8 725 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 ATG14Q6ZNE5 492 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 CLNKQ7Z7G1 428 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 MTDHQ86UE4 582 aaKnown RBP12.34□□□□□ -0.43
CLIP4-203ENST00000401617 ARID3BQ8IVW6 561 aaPredicted RBP12.34□□□□□ -0.43
CLIP4-203ENST00000401617 TNS4Q8IZW8 715 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 CPXM2Q8N436 756 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 KREMEN2Q8NCW0 462 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 PPP1R14CQ8TAE6 165 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 STYXQ8WUJ0 223 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 TMA16Q96EY4 203 aaKnown RBP12.34□□□□□ -0.43
CLIP4-203ENST00000401617 OMDQ99983 421 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 SIKE1Q9BRV8 207 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 SLC40A1Q9NP59 571 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 TXLNGQ9NUQ3 528 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 CXXC1Q9P0U4 656 aaPredicted RBP12.34□□□□□ -0.43
CLIP4-203ENST00000401617 MID2Q9UJV3 735 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 ZNF510Q9Y2H8 683 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 ACOT9Q9Y305 439 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 NOTCH4Q99466 2003 aa12.34□□□□□ -0.43
CLIP4-203ENST00000401617 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 NRG2O14511 850 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 S1PR4O95977 384 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 ATP5BP06576 529 aaKnown RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 C8AP07357 584 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 CDC25CP30307 473 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 ARRB2P32121 409 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 NUMBP49757 651 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 CYP4F8P98187 520 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 GALNT3Q14435 633 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 ZNF789Q5FWF6 425 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 ZYG11AQ6WRX3 759 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 RAPH1Q70E73 1250 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 CCDC91Q7Z6B0 441 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 TMEM106CQ9BVX2 250 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 TDRD1Q9BXT4 1180 aaKnown RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 MUC3BQ9H195 1237 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 SCUBE2Q9NQ36 999 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 ARHGEF3Q9NR81 526 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 FBXO6Q9NRD1 293 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 LHX3Q9UBR4 397 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 ZFP69BQ9UJL9 534 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 A0A087X1B8 175 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 H0Y626 953 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 HGSO14964 777 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 SNAP91O60641 907 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms