RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 FAM182AQ5T1J6 154 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 PLPP6Q8IY26 295 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 AADATQ8N5Z0 425 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 TEX26Q8N6G2 289 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 TTC13Q8NBP0 860 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 COG1Q8WTW3 980 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 ATG4AQ8WYN0 398 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 PBKQ96KB5 322 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 HEPHQ9BQS7 1158 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 CEP41Q9BYV8 373 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 ZDHHC5Q9C0B5 715 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 NEUROG2Q9H2A3 272 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 C10orf88Q9H8K7 445 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 FBXL12Q9NXK8 326 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 IL36AQ9UHA7 158 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 SARDHQ9UL12 918 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 WASF2Q9Y6W5 498 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 KNL1Q8NG31 2342 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 TP53BP1Q12888 1972 aaPredicted RBP25.71■■□□□ 1.71
U2AF1-203ENST00000398137 A0A1B0GVT2 93 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 A0A1W2PP55 124 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 CTAGE9A4FU28 777 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 HACD1B0YJ81 288 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 INSIG1O15503 277 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 SH3BP5O60239 455 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 CSNK1EP49674 416 aaKnown RBP25.71■■□□□ 1.71
U2AF1-203ENST00000398137 METAP1P53582 386 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 MAXP61244 160 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 XRCC4Q13426 336 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 MYLK3Q32MK0 819 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 POM121L1PQ3SYA9 428 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 LAYNQ6UX15 382 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 CDKL3Q8IVW4 592 aaPredicted RBP25.71■■□□□ 1.71
U2AF1-203ENST00000398137 PIP4K2CQ8TBX8 421 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 SNX19Q92543 992 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 SLC32A1Q9H598 525 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 EBF2Q9HAK2 575 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 TM9SF3Q9HD45 589 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 RBM22Q9NW64 420 aaKnown RBP eCLIP25.71■■□□□ 1.71
U2AF1-203ENST00000398137 SCML1Q9UN30 329 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 FNDC3AQ9Y2H6 1198 aaKnown RBP25.71■■□□□ 1.71
U2AF1-203ENST00000398137 TTLL3Q9Y4R7 772 aa25.71■■□□□ 1.71
U2AF1-203ENST00000398137 WDFY3Q8IZQ1 3526 aa25.7■■□□□ 1.71
U2AF1-203ENST00000398137 RNF103O00237 685 aa25.7■■□□□ 1.7
U2AF1-203ENST00000398137 JCHAINP01591 159 aa25.7■■□□□ 1.7
U2AF1-203ENST00000398137 HLA-DQB2P05538 268 aa25.7■■□□□ 1.7
U2AF1-203ENST00000398137 RBP3P10745 1247 aa25.7■■□□□ 1.7
U2AF1-203ENST00000398137 SLC8A1P32418 973 aa25.7■■□□□ 1.7
U2AF1-203ENST00000398137 HSPA9P38646 679 aaKnown RBP25.7■■□□□ 1.7
U2AF1-203ENST00000398137 SLC14A1Q13336 389 aa25.7■■□□□ 1.7
U2AF1-203ENST00000398137 LONRF2Q1L5Z9 754 aa25.7■■□□□ 1.7
U2AF1-203ENST00000398137 ARSIQ5FYB1 569 aa25.7■■□□□ 1.7
U2AF1-203ENST00000398137 MS4A14Q96JA4 679 aa25.7■■□□□ 1.7
U2AF1-203ENST00000398137 IL12RB2Q99665 862 aa25.7■■□□□ 1.7
U2AF1-203ENST00000398137 MGME1Q9BQP7 344 aa25.7■■□□□ 1.7
U2AF1-203ENST00000398137 TMEM121BQ9BXQ6 578 aaPredicted RBP25.7■■□□□ 1.7
U2AF1-203ENST00000398137 PPM1HQ9ULR3 514 aa25.7■■□□□ 1.7
U2AF1-203ENST00000398137 TTC24A2A3L6 582 aaPredicted RBP25.69■■□□□ 1.7
U2AF1-203ENST00000398137 C1QTNF3-AMACRE9PGA6 284 aa25.69■■□□□ 1.7
U2AF1-203ENST00000398137 LEFTY1O75610 366 aa25.69■■□□□ 1.7
U2AF1-203ENST00000398137 FSBPO95073 299 aa25.69■■□□□ 1.7
U2AF1-203ENST00000398137 POP4O95707 220 aaKnown RBP25.69■■□□□ 1.7
U2AF1-203ENST00000398137 ADH1BP00325 375 aa25.69■■□□□ 1.7
U2AF1-203ENST00000398137 PRNPP04156 253 aa25.69■■□□□ 1.7
U2AF1-203ENST00000398137 ETF1P62495 437 aaKnown RBP25.69■■□□□ 1.7
U2AF1-203ENST00000398137 SIM1P81133 766 aaPredicted RBP25.69■■□□□ 1.7
U2AF1-203ENST00000398137 HLA-BQ31612 363 aa25.69■■□□□ 1.7
U2AF1-203ENST00000398137 KIAA0895LQ68EN5 471 aa25.69■■□□□ 1.7
U2AF1-203ENST00000398137 DARS2Q6PI48 645 aaKnown RBP25.69■■□□□ 1.7
U2AF1-203ENST00000398137 SRLQ86TD4 932 aa25.69■■□□□ 1.7
U2AF1-203ENST00000398137 RASGEF1CQ8N431 466 aa25.69■■□□□ 1.7
U2AF1-203ENST00000398137 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.69■■□□□ 1.7
U2AF1-203ENST00000398137 C16orf45Q96MC5 204 aaPredicted RBP25.69■■□□□ 1.7
U2AF1-203ENST00000398137 GAREM1Q9H706 876 aa25.69■■□□□ 1.7
U2AF1-203ENST00000398137 SMARCAL1Q9NZC9 954 aa25.69■■□□□ 1.7
U2AF1-203ENST00000398137 KPNA3O00505 521 aaPredicted RBP25.68■■□□□ 1.7
U2AF1-203ENST00000398137 ZNF185O15231 689 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 CBFA2T3O75081 653 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 PTPN3P26045 913 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 CD27P26842 260 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 RBL1P28749 1068 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 DRD3P35462 400 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 SCNN1BP51168 640 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 ITKQ08881 620 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 SIX1Q15475 284 aaPredicted RBP25.68■■□□□ 1.7
U2AF1-203ENST00000398137 KIF19Q2TAC6 998 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 PAPD7Q5XG87 772 aaKnown RBP25.68■■□□□ 1.7
U2AF1-203ENST00000398137 NCEH1Q6PIU2 408 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 SYT10Q6XYQ8 523 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 NYAP1Q6ZVC0 841 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 TMIEQ8NEW7 156 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 SLC35B2Q8TB61 432 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 GANCQ8TET4 914 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 C1orf54Q8WWF1 131 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 HTR3CQ8WXA8 447 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 FAM131CQ96AQ9 280 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 VOPP1Q96AW1 172 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 USP24Q9UPU5 2620 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 CACNA1BQ00975 2339 aa25.68■■□□□ 1.7
U2AF1-203ENST00000398137 PLK4O00444 970 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms