RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ADGRE3Q9BY15 652 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 KLK14Q9P0G3 267 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 XPR1Q9UBH6 696 aa19.83■□□□□ 0.77
SHANK1-203ENST00000391813 MLYCDO95822 493 aa19.83■□□□□ 0.76
SHANK1-203ENST00000391813 S100A9P06702 114 aaKnown RBP19.83■□□□□ 0.76
SHANK1-203ENST00000391813 WARSP23381 471 aaKnown RBP19.83■□□□□ 0.76
SHANK1-203ENST00000391813 WDR4P57081 412 aaKnown RBP19.83■□□□□ 0.76
SHANK1-203ENST00000391813 SLC27A1Q6PCB7 646 aa19.83■□□□□ 0.76
SHANK1-203ENST00000391813 CAPNS2Q96L46 248 aa19.83■□□□□ 0.76
SHANK1-203ENST00000391813 SLC7A8Q9UHI5 535 aa19.83■□□□□ 0.76
SHANK1-203ENST00000391813 MOSPD1Q9UJG1 213 aa19.83■□□□□ 0.76
SHANK1-203ENST00000391813 COG5Q9UP83 839 aa19.83■□□□□ 0.76
SHANK1-203ENST00000391813 NFASCO94856 1347 aa19.83■□□□□ 0.76
SHANK1-203ENST00000391813 GNG14A0A1W2PPG7 69 aa19.83■□□□□ 0.76
SHANK1-203ENST00000391813 HAT1O14929 419 aa19.83■□□□□ 0.76
SHANK1-203ENST00000391813 NPR3P17342 541 aa19.83■□□□□ 0.76
SHANK1-203ENST00000391813 UBA1P22314 1058 aaKnown RBP19.83■□□□□ 0.76
SHANK1-203ENST00000391813 LHX1P48742 406 aa19.83■□□□□ 0.76
SHANK1-203ENST00000391813 SPRYD7Q5W111 196 aa19.83■□□□□ 0.76
SHANK1-203ENST00000391813 UNC93B1Q9H1C4 597 aa19.83■□□□□ 0.76
SHANK1-203ENST00000391813 FBXO47Q5MNV8 452 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 RNASEH2BQ5TBB1 312 aaKnown RBP19.82■□□□□ 0.76
SHANK1-203ENST00000391813 DRICH1Q6PGQ1 229 aaPredicted RBP19.82■□□□□ 0.76
SHANK1-203ENST00000391813 EPHX4Q8IUS5 362 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 SCUBE3Q8IX30 993 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 HS6ST3Q8IZP7 471 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 LRRC17Q8N6Y2 441 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 BANPQ8N9N5 519 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 COL6A2P12110 1019 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 HGFP14210 728 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 KRT74Q7RTS7 529 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 ADCK2Q7Z695 626 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 GRPEL2Q8TAA5 225 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 NPAS2Q99743 824 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 ZNF624Q9P2J8 865 aaPredicted RBP19.82■□□□□ 0.76
SHANK1-203ENST00000391813 TMEM59LQ9UK28 342 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 TELO2Q9Y4R8 837 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 C2orf71A6NGG8 1288 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 ACKR2O00590 384 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 SERPIND1P05546 499 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 ACADVLP49748 655 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 CRADDP78560 199 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 C10orf120Q5SQS8 335 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 SLC44A2Q8IWA5 706 aaPredicted RBP19.82■□□□□ 0.76
SHANK1-203ENST00000391813 SUN5Q8TC36 379 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 CPT1BQ92523 772 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 LPGAT1Q92604 370 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 ELMO3Q96BJ8 720 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 TPD52L3Q96J77 140 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 RHOBTB2Q9BYZ6 727 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 PREBQ9HCU5 417 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 NMRK2Q9NPI5 230 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 NR2E1Q9Y466 385 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 H7C0S8 307 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 UMPSP11172 480 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 PSMA3P25788 255 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 STAT5AP42229 794 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 SCNN1BP51168 640 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 MAPKAPK3Q16644 382 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 SDE2Q6IQ49 451 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 DEFB106AQ8N104 65 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 DPP10Q8N608 796 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 ZBTB8BQ8NAP8 495 aaPredicted RBP19.82■□□□□ 0.76
SHANK1-203ENST00000391813 KCTD4Q8WVF5 259 aa19.82■□□□□ 0.76
SHANK1-203ENST00000391813 MRPS31Q92665 395 aaKnown RBP19.82■□□□□ 0.76
SHANK1-203ENST00000391813 SNRNP25Q9BV90 132 aaKnown RBP19.82■□□□□ 0.76
SHANK1-203ENST00000391813 H3BN98 237 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 CCNT2O60583 730 aaKnown RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 CCNE2O96020 404 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 GPIP06744 558 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 CNPP09543 421 aaKnown RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 FGRP09769 529 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 ABCG1P45844 678 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 SLC11A2P49281 568 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 ENPEPQ07075 957 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 NOMO1Q15155 1222 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 EMC10Q5UCC4 262 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 ENDOVQ8N8Q3 282 aaKnown RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 ANKRD52Q8NB46 1076 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 DQX1Q8TE96 717 aaKnown RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 Q96MT0 163 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 LENG8Q96PV6 779 aaPredicted RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 HSD17B14Q9BPX1 270 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 ALG9Q9H6U8 611 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 NFKBIEO00221 500 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 SERPINA1P01009 418 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 PPP2R1BP30154 601 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 GRIK3Q13003 919 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 NEK10Q6ZWH5 1172 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 TCAIMQ8N3R3 496 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 PTGR2Q8N8N7 351 aaPredicted RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 SLCO2A1Q92959 643 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 CENPNQ96H22 339 aaPredicted RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 CELF6Q96J87 481 aaKnown RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 CA12O43570 354 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 EPN2O95208 641 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 TPSB2P20231 275 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 ZNF177Q13360 481 aaPredicted RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 TPSAB1Q15661 275 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms