RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 SLC41A1Q8IVJ1 513 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 SPATA6LQ8N4H0 392 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 CCDC63Q8NA47 563 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 LPCAT1Q8NF37 534 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 ITFG1Q8TB96 612 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 HDAC10Q969S8 669 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 DNAJC1Q96KC8 554 aaKnown RBP12.7□□□□□ -0.38
CLCN6-206ENST00000376496 ZNF599Q96NL3 588 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 NDNQ99608 321 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 MARCH4Q9P2E8 410 aaPredicted RBP12.7□□□□□ -0.38
CLCN6-206ENST00000376496 EMCNQ9ULC0 261 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 ANKRD36A6QL64 1941 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 LDB2O43679 373 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 HAUS5O94927 633 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 CR2P20023 1033 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 TNK2Q07912 1038 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 SPRED3Q2MJR0 410 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 N4BP2L1Q5TBK1 243 aaPredicted RBP12.7□□□□□ -0.38
CLCN6-206ENST00000376496 BBS5Q8N3I7 341 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 GDPD5Q8WTR4 605 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 CABS1Q96KC9 395 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 TBATAQ96M53 351 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 TNKS2Q9H2K2 1166 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 ACSS2Q9NR19 701 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 TMEM216Q9P0N5 145 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 LHX3Q9UBR4 397 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 INTS6Q9UL03 887 aaKnown RBP12.7□□□□□ -0.38
CLCN6-206ENST00000376496 PHTF1Q9UMS5 762 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 MTF2Q9Y483 593 aaPredicted RBP12.7□□□□□ -0.38
CLCN6-206ENST00000376496 WNT6Q9Y6F9 365 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 HEATR9A2RTY3 570 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 AP3B1O00203 1094 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 SNX3O60493 162 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 PRLP01236 227 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 DHRS4L1P0CG22 281 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 SPRP35270 261 aaPredicted RBP12.69□□□□□ -0.38
CLCN6-206ENST00000376496 RHOAP61586 193 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 TRAF2Q12933 501 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 THOC5Q13769 683 aaKnown RBP12.69□□□□□ -0.38
CLCN6-206ENST00000376496 RNF187Q5TA31 235 aaPredicted RBP12.69□□□□□ -0.38
CLCN6-206ENST00000376496 ASTLQ6HA08 431 aaPredicted RBP12.69□□□□□ -0.38
CLCN6-206ENST00000376496 CNSTQ6PJW8 725 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 ZC3HC1Q86WB0 502 aaKnown RBP12.69□□□□□ -0.38
CLCN6-206ENST00000376496 EFHBQ8N7U6 833 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 NAT16Q8N8M0 369 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 TRIB3Q96RU7 358 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 ABCB8Q9NUT2 735 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 NEDD8-MDP1E9PL57 170 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 C5orf67F2Z3F1 127 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 NEPROQ6NW34 567 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 TIFABQ6ZNK6 161 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 FAM217AQ8IXS0 508 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 TNS4Q8IZW8 715 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 CCDC197Q8NCU1 140 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 ZNF707Q96C28 371 aaPredicted RBP12.69□□□□□ -0.38
CLCN6-206ENST00000376496 FEM1CQ96JP0 617 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 PPP1R2P1Q96PQ5 205 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 MANSC1Q9H8J5 431 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLCN6-206ENST00000376496 PRKAG3Q9UGI9 489 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 ARHGAP26Q9UNA1 814 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 RAI2Q9Y5P3 530 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 EYSQ5T1H1 3165 aa12.69□□□□□ -0.38
CLCN6-206ENST00000376496 KCNA4P22459 653 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 WEE1P30291 646 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 ABL2P42684 1182 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 NRIP1P48552 1158 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 SEMG2Q02383 582 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 RBM20Q5T481 1227 aaKnown RBP12.68□□□□□ -0.38
CLCN6-206ENST00000376496 OTOAQ7RTW8 1153 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 GPATCH11Q8N954 259 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 FAM136AQ96C01 138 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 MOCOSQ96EN8 888 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 LRRC3BQ96PB8 259 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 HTATIP2Q9BUP3 242 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 TDP1Q9NUW8 608 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 A0A096LPK6 155 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 EPOPA6NHQ4 379 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 LATS1O95835 1130 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 ALADP13716 330 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 CNTFP26441 200 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 HLA-FP30511 346 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 CRHR1P34998 444 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 NAB1Q13506 487 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 FYB2Q5VWT5 728 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 SPATA21Q7Z572 469 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 CAMK1DQ8IU85 385 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 ARID3BQ8IVW6 561 aaPredicted RBP12.68□□□□□ -0.38
CLCN6-206ENST00000376496 CEP97Q8IW35 865 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 MCMBPQ9BTE3 642 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 TDRD1Q9BXT4 1180 aaKnown RBP12.68□□□□□ -0.38
CLCN6-206ENST00000376496 NSRP1Q9H0G5 558 aaKnown RBP12.68□□□□□ -0.38
CLCN6-206ENST00000376496 TASP1Q9H6P5 420 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 PIDD1Q9HB75 910 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 EVLQ9UI08 416 aaPredicted RBP12.68□□□□□ -0.38
CLCN6-206ENST00000376496 FBXO5Q9UKT4 447 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 GOLGA8CPA6NN73 597 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 PIGNO95427 931 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 NDST3O95803 873 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 C2P06681 752 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms