RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SAR1AQ9NR31 198 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 KLC4Q9NSK0 619 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 DNAJC16Q9Y2G8 782 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 CBX4O00257 560 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 STMN1P16949 149 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 CR2P20023 1033 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 TAS2R39P59534 338 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 RFTN1Q14699 578 aaPredicted RBP19.73■□□□□ 0.75
HDAC1-201ENST00000373548 CYTH1Q15438 398 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 SLC14A2Q15849 920 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 PTAR1Q7Z6K3 402 aaPredicted RBP19.73■□□□□ 0.75
HDAC1-201ENST00000373548 LCA5Q86VQ0 697 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 GPATCH11Q8N954 259 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 EXOC2Q96KP1 924 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 TMEM237Q96Q45 408 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 CPSF2Q9P2I0 782 aaKnown RBP19.73■□□□□ 0.75
HDAC1-201ENST00000373548 ACOT9Q9Y305 439 aa19.73■□□□□ 0.75
HDAC1-201ENST00000373548 ANKRD36A6QL64 1941 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.72■□□□□ 0.75
HDAC1-201ENST00000373548 TGM5O43548 720 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 NDST3O95803 873 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 LATS1O95835 1130 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 APOA4P06727 396 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 SBK3P0C264 359 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 CTSAP10619 480 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 COL6A2P12110 1019 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 CA8P35219 290 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 LEPRP48357 1165 aaKnown RBP19.72■□□□□ 0.75
HDAC1-201ENST00000373548 ABCE1P61221 599 aaKnown RBP19.72■□□□□ 0.75
HDAC1-201ENST00000373548 ACVR1Q04771 509 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 PABPC1LQ4VXU2 614 aaKnown RBP19.72■□□□□ 0.75
HDAC1-201ENST00000373548 RBM20Q5T481 1227 aaKnown RBP19.72■□□□□ 0.75
HDAC1-201ENST00000373548 TTC7BQ86TV6 843 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 ALYREFQ86V81 257 aaKnown RBP19.72■□□□□ 0.75
HDAC1-201ENST00000373548 PNPLA1Q8N8W4 532 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 PIWIL2Q8TC59 973 aaKnown RBP19.72■□□□□ 0.75
HDAC1-201ENST00000373548 BLOC1S5Q8TDH9 187 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 WWP1Q9H0M0 922 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 MUC3BQ9H195 1237 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 LRMDAQ9H2I8 198 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 MFSD1Q9H3U5 465 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.72■□□□□ 0.75
HDAC1-201ENST00000373548 RUVBL2Q9Y230 463 aaKnown RBP19.72■□□□□ 0.75
HDAC1-201ENST00000373548 TK2O00142 265 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 FCHO1O14526 889 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 C1RP00736 705 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 KRT16P08779 473 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 HDCP19113 662 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 DNAJB1P25685 340 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 CRABP2P29373 138 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 HNRNPH1P31943 449 aaKnown RBP19.72■□□□□ 0.75
HDAC1-201ENST00000373548 ARF5P84085 180 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 CREMQ03060 361 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 FSCBQ5H9T9 825 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 NAPRTQ6XQN6 538 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 CILP2Q8IUL8 1156 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 OR6P1Q8NGX9 317 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 SLC7A6OSQ96CW6 309 aaPredicted RBP19.72■□□□□ 0.75
HDAC1-201ENST00000373548 TSNARE1Q96NA8 513 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 OMDQ99983 421 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 IL23AQ9NPF7 189 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 CPQQ9Y646 472 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 ARL5AQ9Y689 179 aa19.72■□□□□ 0.75
HDAC1-201ENST00000373548 OR51F1A6NGY5 319 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 GFRA2O00451 464 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 INSIG1O15503 277 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 TBL1XO60907 577 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 PIRTP0C851 137 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 GLRBP48167 497 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 SCNN1BP51168 640 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 PRAMEP78395 509 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 POU4F1Q01851 419 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 DLG1Q12959 904 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 PTPRCAPQ14761 206 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 Q6ZNB5 142 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 GAREM2Q75VX8 874 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 NECAB2Q7Z6G3 386 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 RNF135Q8IUD6 432 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 GABPB2Q8TAK5 448 aaPredicted RBP19.71■□□□□ 0.75
HDAC1-201ENST00000373548 RDH11Q8TC12 318 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 GPR78Q96P69 363 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 NMUR2Q9GZQ4 415 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 MARCH4Q9P2E8 410 aaPredicted RBP19.71■□□□□ 0.75
HDAC1-201ENST00000373548 MID2Q9UJV3 735 aa19.71■□□□□ 0.75
HDAC1-201ENST00000373548 BUD23O43709 281 aaKnown RBP19.7■□□□□ 0.74
HDAC1-201ENST00000373548 MGRN1O60291 552 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 SNAP91O60641 907 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 CD160O95971 181 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 GABRR2P28476 465 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 CYP4F8P98187 520 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 ZYG11AQ6WRX3 759 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 GALNT7Q86SF2 657 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 CARNMT1Q8N4J0 409 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 DNAJC5GQ8N7S2 189 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 BRSK1Q8TDC3 778 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 PPP4R1Q8TF05 950 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 PEX13Q92968 403 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 DNAJC1Q96KC8 554 aaKnown RBP19.7■□□□□ 0.74
HDAC1-201ENST00000373548 TBATAQ96M53 351 aa19.7■□□□□ 0.74
HDAC1-201ENST00000373548 NDNQ99608 321 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms