RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 NOXA1Q86UR1 476 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 TCP11L2Q8N4U5 519 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 GJC3Q8NFK1 279 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 LILRB1Q8NHL6 650 aaPredicted RBP4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 UBXN10Q96LJ8 280 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 TMEM160Q9NX00 188 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 MALT1Q9UDY8 824 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 SLC45A1Q9Y2W3 748 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 LRRTM4Q86VH4 590 aa4.66□□□□□ -1.66
RNU4-28P-201ENST00000364739 SPATA3Q8NHX4 192 aa4.66□□□□□ -1.66
RNU4-28P-201ENST00000364739 GCC1Q96CN9 775 aa4.66□□□□□ -1.66
RNU4-28P-201ENST00000364739 SCMH1Q96GD3 660 aa4.66□□□□□ -1.66
RNU4-28P-201ENST00000364739 ZC3HAV1LQ96H79 300 aaKnown RBP4.66□□□□□ -1.66
RNU4-28P-201ENST00000364739 CSF3RQ99062 836 aa4.66□□□□□ -1.66
RNU4-28P-201ENST00000364739 MPHOSPH8Q99549 860 aa4.66□□□□□ -1.66
RNU4-28P-201ENST00000364739 RRN3Q9NYV6 651 aa4.66□□□□□ -1.66
RNU4-28P-201ENST00000364739 LUZP4Q9P127 313 aa4.66□□□□□ -1.66
RNU4-28P-201ENST00000364739 TAF1P21675 1872 aa4.65□□□□□ -1.66
RNU4-28P-201ENST00000364739 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 PLSCR5A0PG75 271 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 SMTNL1A8MU46 457 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 TEX22C9J3V5 150 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 HSPA12AO43301 675 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 ZNF8P17098 575 aaPredicted RBP4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 GGT5P36269 586 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 PPM1FP49593 454 aaPredicted RBP4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 BLKP51451 505 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 EFNA5P52803 228 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 CDH15P55291 814 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 ERVFC1-1P60608 527 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 RPL36AP83881 106 aaKnown RBP4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 EFNB1P98172 346 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 ST3GAL1Q11201 340 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 GRIK3Q13003 919 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 DHX8Q14562 1220 aaKnown RBP4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 SETMARQ53H47 684 aaPredicted RBP4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 DCAF6Q58WW2 860 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 SPSB3Q6PJ21 355 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 DLK2Q6UY11 383 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 CYP26C1Q6V0L0 522 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 CCDC129Q6ZRS4 1044 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 SHFQ7M4L6 423 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 SFTPA2Q8IWL1 248 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 ZNF114Q8NC26 417 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 ZBTB10Q96DT7 871 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 SLITRK1Q96PX8 696 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 GPR63Q9BZJ6 419 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 GAREM1Q9H706 876 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 SLC9A2Q9UBY0 812 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 SNX9Q9Y5X1 595 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 A3GALT2U3KPV4 340 aa4.65□□□□□ -1.67
RNU4-28P-201ENST00000364739 A0A0U1RQF3 1178 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 A0A0U1RQJ8 604 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 KLK8O60259 260 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 ZIC3O60481 467 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 TACC1O75410 805 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 PYGLP06737 847 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 HSD3B1P14060 373 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 FMO4P31512 558 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 NR1H2P55055 460 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 YWHAZP63104 245 aaKnown RBP4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 ITGADQ13349 1161 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 VEPH1Q14D04 833 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 KIF19Q2TAC6 998 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 SERTAD4-AS1Q5TG53 156 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 FAM69BQ5VUD6 431 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 TADA2BQ86TJ2 420 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 RETREG1Q9H6L5 497 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 NOX4Q9NPH5 578 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 CISD1Q9NZ45 108 aaKnown RBP4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 CNOT7Q9UIV1 285 aaKnown RBP4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 PAM16Q9Y3D7 125 aa4.64□□□□□ -1.67
RNU4-28P-201ENST00000364739 IGLV5-37A0A075B6J1 123 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 A0A1B0GUV1 79 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 NPIPB11E5RHQ5 1161 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 GALTP07902 379 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 PTPN2P17706 415 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 ITGAXP20702 1163 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 MAPK9P45984 424 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 GAS1P54826 345 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 BIRC3Q13489 604 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 TAF11Q15544 211 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 EFNB3Q15768 340 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 ZNF766Q5HY98 468 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 FAM76BQ5HYJ3 339 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 EFHC1Q5JVL4 640 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 PAPPA-AS1Q5QFB9 102 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 B3GNT6Q6ZMB0 384 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 LRRC8DQ7L1W4 858 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 ZC3HC1Q86WB0 502 aaKnown RBP4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 TDRPQ86YL5 185 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 DHX40Q8IX18 779 aaKnown RBP4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 TNIP2Q8NFZ5 429 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 SPATA20Q8TB22 786 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 HVCN1Q96D96 273 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 ADGRG7Q96K78 797 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 LRFN5Q96NI6 719 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 MXRA8Q9BRK3 442 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 INTS2Q9H0H0 1204 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms