RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 CDK18Q07002 472 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 MSLNQ13421 630 aaPredicted RBP18.75■□□□□ 0.59
HOXA9-201ENST00000343483 GALNT3Q14435 633 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 RNF219Q5W0B1 726 aaPredicted RBP18.75■□□□□ 0.59
HOXA9-201ENST00000343483 CLEC14AQ86T13 490 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 SETD3Q86TU7 594 aaPredicted RBP18.75■□□□□ 0.59
HOXA9-201ENST00000343483 EXOC2Q96KP1 924 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 MIPEPQ99797 713 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 ZBP1Q9H171 429 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 TGM5O43548 720 aa18.74■□□□□ 0.59
HOXA9-201ENST00000343483 CPA3P15088 417 aa18.74■□□□□ 0.59
HOXA9-201ENST00000343483 CALB2P22676 271 aa18.74■□□□□ 0.59
HOXA9-201ENST00000343483 CREMQ03060 361 aa18.74■□□□□ 0.59
HOXA9-201ENST00000343483 HSF5Q4G112 596 aaPredicted RBP18.74■□□□□ 0.59
HOXA9-201ENST00000343483 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.74■□□□□ 0.59
HOXA9-201ENST00000343483 C2CD4AQ8NCU7 369 aaPredicted RBP18.74■□□□□ 0.59
HOXA9-201ENST00000343483 OR13J1Q8NGT2 312 aa18.74■□□□□ 0.59
HOXA9-201ENST00000343483 BADQ92934 168 aa18.74■□□□□ 0.59
HOXA9-201ENST00000343483 FEM1CQ96JP0 617 aa18.74■□□□□ 0.59
HOXA9-201ENST00000343483 MGME1Q9BQP7 344 aa18.74■□□□□ 0.59
HOXA9-201ENST00000343483 BTBD10Q9BSF8 475 aa18.74■□□□□ 0.59
HOXA9-201ENST00000343483 ARMCX1Q9P291 453 aa18.74■□□□□ 0.59
HOXA9-201ENST00000343483 FBXO5Q9UKT4 447 aa18.74■□□□□ 0.59
HOXA9-201ENST00000343483 MYLKQ15746 1914 aa18.74■□□□□ 0.59
HOXA9-201ENST00000343483 FAM95CA0A1B0GW59 222 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 CCL22O00626 93 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 LILRB3O75022 631 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 SIN3BO75182 1162 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 C1RP00736 705 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 ESRRAP11474 423 aaPredicted RBP18.73■□□□□ 0.59
HOXA9-201ENST00000343483 HDCP19113 662 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 CD151P48509 253 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 PABPC1LQ4VXU2 614 aaKnown RBP18.73■□□□□ 0.59
HOXA9-201ENST00000343483 ARMC3Q5W041 872 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 FAM91A1Q658Y4 838 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 RNF135Q8IUD6 432 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 FIBCD1Q8N539 461 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 GPATCH11Q8N954 259 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 BLOC1S5Q8TDH9 187 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 PSKH2Q96QS6 385 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 ZBED2Q9BTP6 218 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 EBF2Q9HAK2 575 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 IL21Q9HBE4 155 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 IL23AQ9NPF7 189 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 NOP53Q9NZM5 478 aaKnown RBP18.73■□□□□ 0.59
HOXA9-201ENST00000343483 TBC1D30Q9Y2I9 924 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 CPQQ9Y646 472 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.73■□□□□ 0.59
HOXA9-201ENST00000343483 MROH6A6NGR9 719 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 TBL1XO60907 577 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 LYPLA1O75608 230 aaPredicted RBP18.73■□□□□ 0.59
HOXA9-201ENST00000343483 ANP32DO95626 131 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 CTSAP10619 480 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 HLA-DPA1P20036 260 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 SCNN1BP51168 640 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 ACCSLQ4AC99 568 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 CXorf57Q6NSI4 855 aaKnown RBP18.73■□□□□ 0.59
HOXA9-201ENST00000343483 MFSD6LQ8IWD5 586 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 CARNMT1Q8N4J0 409 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 OR6P1Q8NGX9 317 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 ELMO2Q96JJ3 720 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 TSNARE1Q96NA8 513 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 CADM1Q9BY67 442 aaKnown RBP18.73■□□□□ 0.59
HOXA9-201ENST00000343483 TASP1Q9H6P5 420 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 NMRAL1Q9HBL8 299 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 MAFFQ9ULX9 164 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 KCTD3Q9Y597 815 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 CDH23Q9H251 3354 aa18.73■□□□□ 0.59
HOXA9-201ENST00000343483 H0Y626 953 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 AURKAO14965 403 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 GYG2O15488 501 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 ITM2AO43736 263 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 PAPSS2O95340 614 aaPredicted RBP18.72■□□□□ 0.59
HOXA9-201ENST00000343483 SERPINE1P05121 402 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 FGF1P05230 155 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 PIRTP0C851 137 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 SLC35E2BP0CK96 405 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 GABRR2P28476 465 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 MAGEA10P43363 369 aaPredicted RBP18.72■□□□□ 0.59
HOXA9-201ENST00000343483 RGRP47804 291 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 SLC1A6P48664 564 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 PRAMEP78395 509 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 ZXDBP98169 803 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 CYP4F8P98187 520 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 ZNF460Q14592 562 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 ALG1LQ6GMV1 187 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 PTAR1Q7Z6K3 402 aaPredicted RBP18.72■□□□□ 0.59
HOXA9-201ENST00000343483 KLHL23Q8NBE8 558 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 CALML6Q8TD86 181 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 BHMTQ93088 406 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 CPSF2Q9P2I0 782 aaKnown RBP18.72■□□□□ 0.59
HOXA9-201ENST00000343483 ANKRD6Q9Y2G4 727 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 LDB2O43679 373 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 RALBP11234 206 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 STMN1P16949 149 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 SLC12A1Q13621 1099 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 ITGA9Q13797 1035 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 WASHC2DQ5SRD0 308 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 RINLQ6ZS11 566 aa18.72■□□□□ 0.59
HOXA9-201ENST00000343483 TMC7Q7Z402 723 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms