RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 GDI1P31150 447 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 SOX9P48436 509 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 TMCO4Q5TGY1 634 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 LVRNQ6Q4G3 990 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 OR13C4Q8NGS5 318 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 NT5C3BQ969T7 300 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 EBNA1BP2Q99848 306 aaKnown RBP16.02■□□□□ 0.15
PDGFB-201ENST00000331163 TRIM4Q9C037 500 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 ARHGEF38Q9NXL2 777 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 TRHDEQ9UKU6 1024 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 CORO1CQ9ULV4 474 aaPredicted RBP16.02■□□□□ 0.15
PDGFB-201ENST00000331163 FSHRP23945 695 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 GPX6P59796 221 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 RCN2Q14257 317 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 DET1Q7L5Y6 550 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 CAND1Q86VP6 1230 aaKnown RBP16.01■□□□□ 0.15
PDGFB-201ENST00000331163 RCOR3Q9P2K3 495 aaPredicted RBP16.01■□□□□ 0.15
PDGFB-201ENST00000331163 AKT1P31749 480 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 CD68P34810 354 aaPredicted RBP16.01■□□□□ 0.15
PDGFB-201ENST00000331163 RGRP47804 291 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 CREMQ03060 361 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 BCL2L1Q07817 233 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 PAFAH1B3Q15102 231 aaKnown RBP16.01■□□□□ 0.15
PDGFB-201ENST00000331163 CHST9Q7L1S5 443 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 GSDMBQ8TAX9 411 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 UCMAQ8WVF2 138 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 HERVK_113Q902F9 699 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 FRMD8P1Q9BZ68 369 aaPredicted RBP16.01■□□□□ 0.15
PDGFB-201ENST00000331163 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.01■□□□□ 0.15
PDGFB-201ENST00000331163 CIDEBQ9UHD4 219 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 VPS51Q9UID3 782 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 PSAT1Q9Y617 370 aa16.01■□□□□ 0.15
PDGFB-201ENST00000331163 C1orf232A0A0U1RR37 186 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 PLK4O00444 970 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 GCATO75600 419 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 ARSAP15289 507 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 CHRM3P20309 590 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 SERPINH1P50454 418 aaKnown RBP16■□□□□ 0.15
PDGFB-201ENST00000331163 ZXDBP98169 803 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 MPP1Q00013 466 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 CDK18Q07002 472 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 MGAT5Q09328 741 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 GALNT2Q10471 571 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 ARHGAP12Q8IWW6 846 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 FGF13Q92913 245 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 RILPQ96NA2 401 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 SLC25A13Q9UJS0 675 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 RAI2Q9Y5P3 530 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 ANKRD12Q6UB98 2062 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 A0A0G2JND7 137 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 ALOX15BO15296 676 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 ASMTLO95671 621 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 PRSS56P0CW18 603 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 CDH4P55283 916 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 MPP3Q13368 585 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 OR4K2Q8NGD2 314 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 MECRQ9BV79 373 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 GBA3Q9H227 469 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 TASP1Q9H6P5 420 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 TXLNGQ9NUQ3 528 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 SLC30A1Q9Y6M5 507 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 CABIN1Q9Y6J0 2220 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 E5RI56 91 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 NDC80O14777 642 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 CLASP2O75122 1294 aaKnown RBP16■□□□□ 0.15
PDGFB-201ENST00000331163 F11P03951 625 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 PAMP19021 973 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 PBLDP30039 288 aaPredicted RBP16■□□□□ 0.15
PDGFB-201ENST00000331163 C1orf53Q5VUE5 145 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 ANO7Q6IWH7 933 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 KLK6Q92876 244 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 HDAC11Q96DB2 347 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 PRICKLE1Q96MT3 831 aaPredicted RBP16■□□□□ 0.15
PDGFB-201ENST00000331163 ARHGEF3Q9NR81 526 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 ZNF358Q9NW07 568 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 ETAA1Q9NY74 926 aa16■□□□□ 0.15
PDGFB-201ENST00000331163 FARP1Q9Y4F1 1045 aaPredicted RBP16■□□□□ 0.15
PDGFB-201ENST00000331163 CLUHO75153 1309 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 NDUFS3O75489 264 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 CCNCP24863 283 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 RANBP1P43487 201 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 AIF1P55008 147 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 FAM151BQ6UXP7 276 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 DNAJC9Q8WXX5 260 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 MAML1Q92585 1016 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 USP13Q92995 863 aaPredicted RBP15.99■□□□□ 0.15
PDGFB-201ENST00000331163 MOCOSQ96EN8 888 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 DNAJC1Q96KC8 554 aaKnown RBP15.99■□□□□ 0.15
PDGFB-201ENST00000331163 MLPHQ9BV36 600 aaPredicted RBP15.99■□□□□ 0.15
PDGFB-201ENST00000331163 DPP7Q9UHL4 492 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 ZNF197O14709 1029 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 INSIG1O15503 277 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 TRIM16O95361 564 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 UBTFL6P0CB48 400 aaPredicted RBP15.99■□□□□ 0.15
PDGFB-201ENST00000331163 KCNA4P22459 653 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 ADRA1DP25100 572 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 RPA3P35244 121 aaPredicted RBP15.99■□□□□ 0.15
PDGFB-201ENST00000331163 NIPAL4Q0D2K0 466 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 LMAN2Q12907 356 aa15.99■□□□□ 0.15
PDGFB-201ENST00000331163 OMDQ99983 421 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms