RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 DCTN4Q9UJW0 460 aa21.42■■□□□ 1.02
ATG4D-201ENST00000309469 SLC12A4Q9UP95 1085 aa21.42■■□□□ 1.02
ATG4D-201ENST00000309469 ANKRD6Q9Y2G4 727 aa21.42■■□□□ 1.02
ATG4D-201ENST00000309469 KCTD3Q9Y597 815 aa21.42■■□□□ 1.02
ATG4D-201ENST00000309469 MYLKQ15746 1914 aa21.42■■□□□ 1.02
ATG4D-201ENST00000309469 SNNO75324 88 aaPredicted RBP21.41■■□□□ 1.02
ATG4D-201ENST00000309469 HAUS5O94927 633 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 DNAJB1P25685 340 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 OCRLQ01968 901 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 CDH18Q13634 790 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 PCLAFQ15004 111 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 PPM1LQ5SGD2 360 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 MBLAC2Q68D91 279 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 LINGO4Q6UY18 593 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 RNF135Q8IUD6 432 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 SLC41A1Q8IVJ1 513 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 SPPL3Q8TCT6 385 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 BRSK1Q8TDC3 778 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 POF1BQ8WVV4 589 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 HDAC10Q969S8 669 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 NUDCD1Q96RS6 583 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 SLC46A2Q9BY10 475 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.41■■□□□ 1.02
ATG4D-201ENST00000309469 COPG2Q9UBF2 871 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 VPS28Q9UK41 221 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 CHKBQ9Y259 395 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 ARIH1Q9Y4X5 557 aaPredicted RBP21.41■■□□□ 1.02
ATG4D-201ENST00000309469 FAM95CA0A1B0GW59 222 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 TMCC1O94876 653 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 PFKLP17858 780 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 KCNA4P22459 653 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 CSKP41240 450 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 ARSDP51689 593 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 ACVR1Q04771 509 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 MFSD6LQ8IWD5 586 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 BBS7Q8IWZ6 715 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 CPXM2Q8N436 756 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 PPP1R14CQ8TAE6 165 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 PEX13Q92968 403 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 MFSD1Q9H3U5 465 aa21.41■■□□□ 1.02
ATG4D-201ENST00000309469 HGSO14964 777 aaPredicted RBP21.4■■□□□ 1.02
ATG4D-201ENST00000309469 PHGDHO43175 533 aaKnown RBP21.4■■□□□ 1.02
ATG4D-201ENST00000309469 DCTN3O75935 186 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 FGF3P11487 239 aaPredicted RBP21.4■■□□□ 1.02
ATG4D-201ENST00000309469 CPA3P15088 417 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 CLCN4P51793 760 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 PRAMEP78395 509 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 SETDB1Q15047 1291 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 TAF1BQ53T94 588 aaPredicted RBP21.4■■□□□ 1.02
ATG4D-201ENST00000309469 INO80DQ53TQ3 878 aaPredicted RBP21.4■■□□□ 1.02
ATG4D-201ENST00000309469 ZCCHC23Q6ZST2 131 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 PTAR1Q7Z6K3 402 aaPredicted RBP21.4■■□□□ 1.02
ATG4D-201ENST00000309469 C10orf107Q8IVU9 208 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 C7orf61Q8IZ16 206 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 TDRD5Q8NAT2 981 aaKnown RBP21.4■■□□□ 1.02
ATG4D-201ENST00000309469 OR6P1Q8NGX9 317 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 WFDC5Q8TCV5 224 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 DDI1Q8WTU0 396 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 BHMTQ93088 406 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 ALG14Q96F25 216 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 ZNF395Q9H8N7 513 aaPredicted RBP21.4■■□□□ 1.02
ATG4D-201ENST00000309469 TLR9Q9NR96 1032 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 FBXO6Q9NRD1 293 aaPredicted RBP21.4■■□□□ 1.02
ATG4D-201ENST00000309469 THAP1Q9NVV9 213 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 ARL5AQ9Y689 179 aa21.4■■□□□ 1.02
ATG4D-201ENST00000309469 OBSL1O75147 1896 aa21.39■■□□□ 1.02
ATG4D-201ENST00000309469 DLDP09622 509 aaKnown RBP21.39■■□□□ 1.02
ATG4D-201ENST00000309469 HSPA1AP0DMV8 641 aaKnown RBP21.39■■□□□ 1.02
ATG4D-201ENST00000309469 HSPA1BP0DMV9 641 aaKnown RBP21.39■■□□□ 1.02
ATG4D-201ENST00000309469 LEPRP48357 1165 aaKnown RBP21.39■■□□□ 1.02
ATG4D-201ENST00000309469 RAB10P61026 200 aa21.39■■□□□ 1.02
ATG4D-201ENST00000309469 BNIP1Q12981 228 aa21.39■■□□□ 1.02
ATG4D-201ENST00000309469 SLC12A1Q13621 1099 aa21.39■■□□□ 1.02
ATG4D-201ENST00000309469 CNSTQ6PJW8 725 aa21.39■■□□□ 1.02
ATG4D-201ENST00000309469 LCA5Q86VQ0 697 aa21.39■■□□□ 1.02
ATG4D-201ENST00000309469 MFN1Q8IWA4 741 aa21.39■■□□□ 1.02
ATG4D-201ENST00000309469 LRRC37BQ96QE4 947 aa21.39■■□□□ 1.02
ATG4D-201ENST00000309469 C1QTNF1Q9BXJ1 281 aa21.39■■□□□ 1.02
ATG4D-201ENST00000309469 TDRD1Q9BXT4 1180 aaKnown RBP21.39■■□□□ 1.02
ATG4D-201ENST00000309469 KCNK13Q9HB14 408 aa21.39■■□□□ 1.02
ATG4D-201ENST00000309469 NMRAL1Q9HBL8 299 aa21.39■■□□□ 1.02
ATG4D-201ENST00000309469 HCFC1R1Q9NWW0 138 aa21.39■■□□□ 1.02
ATG4D-201ENST00000309469 RIMKLBQ9ULI2 386 aa21.39■■□□□ 1.02
ATG4D-201ENST00000309469 A0A0G2JND7 137 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 LEFTY2O00292 366 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 CCL22O00626 93 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 AURKAO14965 403 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 PIRTP0C851 137 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 SLC35E2BP0CK96 405 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 STMN1P16949 149 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 CRABP2P29373 138 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 AVPR1AP37288 418 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 CCR2P41597 374 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 NSUN2Q08J23 767 aaKnown RBP eCLIP21.39■■□□□ 1.01
ATG4D-201ENST00000309469 MPPE1Q53F39 396 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 GALNT7Q86SF2 657 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 LMNTD2Q8IXW0 634 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 TNS4Q8IZW8 715 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 MICAL1Q8TDZ2 1067 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 ELMO2Q96JJ3 720 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms