RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 DLX3O60479 287 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 SH3BGRLO75368 114 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 KATNA1O75449 491 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 AHSGP02765 367 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 ITGB6P18564 788 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 GNA12Q03113 381 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 MADCAM1Q13477 382 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 ADGRE1Q14246 886 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 ZNF789Q5FWF6 425 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 PSTKQ8IV42 348 aaKnown RBP14.7□□□□□ -0.06
PTPN9-201ENST00000306726 ATPAF2Q8N5M1 289 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 DNAJC5GQ8N7S2 189 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 FNIP1Q8TF40 1166 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 NUDT8Q8WV74 236 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 STK39Q9UEW8 545 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 GABRQQ9UN88 632 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 A0A1W2PPW3 197 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 ABLIM1O14639 778 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 CTGFP29279 349 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 DPP6P42658 865 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 LSAMPQ13449 338 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 GRTP1Q5TC63 336 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 SH2D5Q6ZV89 423 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 TRPC4APQ8TEL6 797 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 SKA2Q8WVK7 121 aaPredicted RBP14.7□□□□□ -0.06
PTPN9-201ENST00000306726 NCLNQ969V3 563 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 RBBP8Q99708 897 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 ARHGAP39Q9C0H5 1083 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 MID1IP1Q9NPA3 183 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 ZNF180Q9UJW8 692 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 MYRFQ9Y2G1 1151 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 PCDHB12Q9Y5F1 795 aa14.7□□□□□ -0.06
PTPN9-201ENST00000306726 BDNFP23560 247 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 TSPY1Q01534 308 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 DGCR6Q14129 220 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 AAGABQ6PD74 315 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 DHFR2Q86XF0 187 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 CEP97Q8IW35 865 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 HEXDCQ8WVB3 486 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 TRIB2Q92519 343 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 BRCA2P51587 3418 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 LGALS2P05162 132 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 PFKMP08237 780 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 PTPN3P26045 913 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 MTTPP55157 894 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 PRKAA1Q13131 559 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 AFAP1L2Q8N4X5 818 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 EFHBQ8N7U6 833 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 ARNTL2Q8WYA1 636 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 PLEKHG4BQ96PX9 1271 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 TNFSF13BQ9Y275 285 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 TRIM17Q9Y577 477 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 STYXL1Q9Y6J8 313 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.69□□□□□ -0.06
PTPN9-201ENST00000306726 MOXD2PA6NHM9 499 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 MEIS3P2A8K0S8 358 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 POMCP01189 267 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 GRK4P32298 578 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 GPR158Q5T848 1215 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 TLK2Q86UE8 772 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 RTKNQ9BST9 563 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 BRD8Q9H0E9 1235 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 DDX43Q9NXZ2 648 aaKnown RBP14.69□□□□□ -0.06
PTPN9-201ENST00000306726 EFR3BQ9Y2G0 817 aa14.69□□□□□ -0.06
PTPN9-201ENST00000306726 LAMA2P24043 3122 aaKnown RBP14.69□□□□□ -0.06
PTPN9-201ENST00000306726 A8MX80 341 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 SUPT3HB4E1H0 165 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 MDM4O15151 490 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 E2F6O75461 281 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 CABYRO75952 493 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 CYP2C9P11712 490 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 SMPD1P17405 629 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 ARL13BQ3SXY8 428 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 ZNF484Q5JVG2 852 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 TMEM214Q6NUQ4 689 aaKnown RBP14.68□□□□□ -0.06
PTPN9-201ENST00000306726 UGT2A3Q6UWM9 527 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 NIFKQ9BYG3 293 aaKnown RBP14.68□□□□□ -0.06
PTPN9-201ENST00000306726 FRMD8P1Q9BZ68 369 aaPredicted RBP14.68□□□□□ -0.06
PTPN9-201ENST00000306726 SELENONQ9NZV5 590 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 SCHIP1Q9P0W5 487 aaPredicted RBP14.68□□□□□ -0.06
PTPN9-201ENST00000306726 RSL24D1Q9UHA3 163 aaKnown RBP14.68□□□□□ -0.06
PTPN9-201ENST00000306726 RAP2CQ9Y3L5 183 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 KCTD3Q9Y597 815 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 MYL3P08590 195 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 HSPA8P11142 646 aaKnown RBP14.68□□□□□ -0.06
PTPN9-201ENST00000306726 CST5P28325 142 aaPredicted RBP14.68□□□□□ -0.06
PTPN9-201ENST00000306726 LPIN1Q14693 890 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 CCDC153Q494R4 210 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 KLC3Q6P597 504 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 TMEM26Q6ZUK4 368 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 DRAXINQ8NBI3 349 aaPredicted RBP14.68□□□□□ -0.06
PTPN9-201ENST00000306726 PCSK9Q8NBP7 692 aaKnown RBP14.68□□□□□ -0.06
PTPN9-201ENST00000306726 RIN3Q8TB24 985 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 PBXIP1Q96AQ6 731 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 LRRC39Q96DD0 335 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 QKIQ96PU8 341 aaKnown RBP eCLIP14.68□□□□□ -0.06
PTPN9-201ENST00000306726 ALG2Q9H553 416 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 WDR70Q9NW82 654 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 FLRT1Q9NZU1 646 aa14.68□□□□□ -0.06
PTPN9-201ENST00000306726 CROTQ9UKG9 612 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms