RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 FBXO48Q5FWF7 155 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 SNX27Q96L92 541 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 FBXO5Q9UKT4 447 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 PTGDR2Q9Y5Y4 395 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 PCNTO95613 3336 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 ERI2A8K979 691 aaKnown RBP14.81□□□□□ -0.04
CCNF-201ENST00000293968 MTSS1O43312 755 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 PSMA4P25789 261 aaKnown RBP14.81□□□□□ -0.04
CCNF-201ENST00000293968 FAM187BQ17R55 369 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 GRAMD4Q6IC98 578 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 FNDC8Q8TC99 324 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 ISL2Q96A47 359 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 ISOC1Q96CN7 298 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 TEKT5Q96M29 485 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 SEPHS2Q99611 448 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 TNFRSF12AQ9NP84 129 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 WDR81Q562E7 1941 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 ADCYAP1R1P41586 468 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 HK2P52789 917 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 TPD52P55327 224 aaPredicted RBP14.81□□□□□ -0.04
CCNF-201ENST00000293968 RFTN1Q14699 578 aaPredicted RBP14.81□□□□□ -0.04
CCNF-201ENST00000293968 OSTM1Q86WC4 334 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 LRRC52Q8N7C0 313 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 OR2T34Q8NGX1 318 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 OR2T3Q8NH03 318 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 MAGEE2Q8TD90 523 aaPredicted RBP14.81□□□□□ -0.04
CCNF-201ENST00000293968 LRCH3Q96II8 777 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 VPS50Q96JG6 964 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 OSBPL2Q9H1P3 480 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 RNF39Q9H2S5 420 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 CXorf21Q9HAI6 301 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 TRAF6Q9Y4K3 522 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 GMEB1Q9Y692 573 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 DHRS12A0PJE2 317 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 SOCS7O14512 581 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 NCAM2O15394 837 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 LRIG2O94898 1065 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 CYP2C9P11712 490 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 CHRM3P20309 590 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 ATP6V1B2P21281 511 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 EMP3P54852 163 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 OTUD3Q5T2D3 398 aaPredicted RBP14.81□□□□□ -0.04
CCNF-201ENST00000293968 AGAP9Q5VTM2 703 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 HMBOX1Q6NT76 420 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 NEPROQ6NW34 567 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 CARM1Q86X55 608 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 MFSD6LQ8IWD5 586 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.81□□□□□ -0.04
CCNF-201ENST00000293968 A0A1W2PPW3 197 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 FASP25445 335 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 MAP4P27816 1152 aaKnown RBP14.81□□□□□ -0.04
CCNF-201ENST00000293968 CYP51A1Q16850 503 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 TSTD2Q5T7W7 516 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 OTUD1Q5VV17 481 aaPredicted RBP14.81□□□□□ -0.04
CCNF-201ENST00000293968 NOTUMQ6P988 496 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 FAM35AQ86V20 835 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 RIN3Q8TB24 985 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 SLCO4A1Q96BD0 722 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 ADI1Q9BV57 179 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 SLC2A11Q9BYW1 496 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 SMOXQ9NWM0 555 aa14.81□□□□□ -0.04
CCNF-201ENST00000293968 LTBP4Q8N2S1 1624 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 SMIM28A0A1B0GU29 152 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 ZSCAN9O15535 394 aaPredicted RBP14.8□□□□□ -0.04
CCNF-201ENST00000293968 IMPDH2P12268 514 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 TXNL4AP83876 142 aaKnown RBP14.8□□□□□ -0.04
CCNF-201ENST00000293968 ZIK1Q3SY52 487 aaPredicted RBP14.8□□□□□ -0.04
CCNF-201ENST00000293968 TMEM26Q6ZUK4 368 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 CAMK1DQ8IU85 385 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 TMEM151AQ8N4L1 468 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 DNAJB14Q8TBM8 379 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 TUBGCP3Q96CW5 907 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 PLEKHG4BQ96PX9 1271 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 PRDM16Q9HAZ2 1276 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 UTP6Q9NYH9 597 aaKnown RBP14.8□□□□□ -0.04
CCNF-201ENST00000293968 GPRC5DQ9NZD1 345 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 CRYL1Q9Y2S2 319 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 PTPRFP10586 1907 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 A8MT66 165 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 BTBD19C9JJ37 291 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 IPO13O94829 963 aaKnown RBP14.8□□□□□ -0.04
CCNF-201ENST00000293968 CD4P01730 458 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 NCK1P16333 377 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 PHEXP78562 749 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 TRAF2Q12933 501 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 ZNF789Q5FWF6 425 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 CRYBG2Q8N1P7 616 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 OR52K2Q8NGK3 314 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 TRIM15Q9C019 465 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 NUDT5Q9UKK9 219 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 PADI4Q9UM07 663 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 BTRCQ9Y297 605 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 AAR2Q9Y312 384 aaKnown RBP14.8□□□□□ -0.04
CCNF-201ENST00000293968 SQORQ9Y6N5 450 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 STAU1O95793 577 aaKnown RBP14.8□□□□□ -0.04
CCNF-201ENST00000293968 MTHFD1P11586 935 aaKnown RBP14.8□□□□□ -0.04
CCNF-201ENST00000293968 CBX3Q13185 183 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 BORAQ6PGQ7 559 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 NFKBIZQ9BYH8 718 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 RBM22Q9NW64 420 aaKnown RBP eCLIP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms