RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 MRPS23Q9Y3D9 190 aaKnown RBP11.08□□□□□ -0.64
GGPS1-201ENST00000282841 SPO11Q9Y5K1 396 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 LINC01565O15544 149 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 USP1O94782 785 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 CTPS1P17812 591 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 ABL2P42684 1182 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 SERPINH1P50454 418 aaKnown RBP11.08□□□□□ -0.64
GGPS1-201ENST00000282841 MESP2Q0VG99 397 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 TCEAL5Q5H9L2 206 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 PCID2Q5JVF3 399 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 SPANXN3Q5MJ09 141 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 FSTL4Q6MZW2 842 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 SH2D5Q6ZV89 423 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 ZNF366Q8N895 744 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 HJURPQ8NCD3 748 aaPredicted RBP11.08□□□□□ -0.64
GGPS1-201ENST00000282841 PPM1EQ8WY54 764 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 SMG7Q92540 1137 aaKnown RBP11.08□□□□□ -0.64
GGPS1-201ENST00000282841 SRPK1Q96SB4 655 aaKnown RBP11.08□□□□□ -0.64
GGPS1-201ENST00000282841 NDNQ99608 321 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 ACE2Q9BYF1 805 aaPredicted RBP11.08□□□□□ -0.64
GGPS1-201ENST00000282841 SCUBE2Q9NQ36 999 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 FBXO6Q9NRD1 293 aaPredicted RBP11.08□□□□□ -0.64
GGPS1-201ENST00000282841 LZTS1Q9Y250 596 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 DENND4CQ5VZ89 1909 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 FAM237BA0A1B0GVD1 139 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 COPEO14579 308 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 PHGDHO43175 533 aaKnown RBP11.07□□□□□ -0.64
GGPS1-201ENST00000282841 PIGNO95427 931 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 ASMTLO95671 621 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 DRD4P21917 467 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 HLA-FP30511 346 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 SLC7A9P82251 487 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 CDK18Q07002 472 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 OVGP1Q12889 678 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 MPP3Q13368 585 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 LY6G5CQ5SRR4 150 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 ZNF470Q6ECI4 717 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 CAMK1DQ8IU85 385 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 LRRC49Q8IUZ0 686 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 DCLK2Q8N568 766 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 PPHLN1Q8NEY8 458 aaKnown RBP11.07□□□□□ -0.64
GGPS1-201ENST00000282841 CDKL2Q92772 493 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 HDAC10Q969S8 669 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 RSPRY1Q96DX4 576 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 BBS2Q9BXC9 721 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 SLC39A10Q9ULF5 831 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 TCAF1Q9Y4C2 921 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 ATG2BQ96BY7 2078 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 MTCL1Q9Y4B5 1905 aaKnown RBP11.07□□□□□ -0.64
GGPS1-201ENST00000282841 TYW5A2RUC4 315 aaKnown RBP11.07□□□□□ -0.64
GGPS1-201ENST00000282841 ZMPSTE24O75844 475 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 KRT38O76015 456 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 AHSGP02765 367 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 SERPINF2P08697 491 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 NEFHP12036 1026 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 RHOAP61586 193 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 ACCSLQ4AC99 568 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 ZCCHC23Q6ZST2 131 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 HTR3DQ70Z44 454 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 SETD3Q86TU7 594 aaPredicted RBP11.07□□□□□ -0.64
GGPS1-201ENST00000282841 TNS4Q8IZW8 715 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 PLD6Q8N2A8 252 aaKnown RBP11.07□□□□□ -0.64
GGPS1-201ENST00000282841 ALG14Q96F25 216 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 DNAJC1Q96KC8 554 aaKnown RBP11.07□□□□□ -0.64
GGPS1-201ENST00000282841 TBATAQ96M53 351 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 PSKH2Q96QS6 385 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 KIFC1Q9BW19 673 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 MARCH4Q9P2E8 410 aaPredicted RBP11.07□□□□□ -0.64
GGPS1-201ENST00000282841 SEPT3Q9UH03 358 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 EVLQ9UI08 416 aaPredicted RBP11.07□□□□□ -0.64
GGPS1-201ENST00000282841 SLCO3A1Q9UIG8 710 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 OR51B4Q9Y5P0 310 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 CHD5Q8TDI0 1954 aa11.07□□□□□ -0.64
GGPS1-201ENST00000282841 HAUS5O94927 633 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 ALPIP09923 528 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 TSHRP16473 764 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 TYK2P29597 1187 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 SLC1A2P43004 574 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 PDE1CQ14123 709 aaPredicted RBP11.06□□□□□ -0.64
GGPS1-201ENST00000282841 GRM3Q14832 879 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 POM121L1PQ3SYA9 428 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 RARS2Q5T160 578 aaKnown RBP11.06□□□□□ -0.64
GGPS1-201ENST00000282841 MFSD6LQ8IWD5 586 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 CCDC63Q8NA47 563 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 OR13J1Q8NGT2 312 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 CKAP2Q8WWK9 683 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 STOML2Q9UJZ1 356 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 PCDHB9Q9Y5E1 797 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 C5orf67F2Z3F1 127 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 FAM107AO95990 144 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 PRLP01236 227 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 TAC1P20366 129 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 GLRBP48167 497 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 ARCN1P48444 511 aaKnown RBP11.06□□□□□ -0.64
GGPS1-201ENST00000282841 TNK2Q07912 1038 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 TRAF2Q12933 501 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 MSLNQ13421 630 aaPredicted RBP11.06□□□□□ -0.64
GGPS1-201ENST00000282841 FYB2Q5VWT5 728 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 CNSTQ6PJW8 725 aa11.06□□□□□ -0.64
GGPS1-201ENST00000282841 CHST9Q7L1S5 443 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms