RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 RAPSNQ13702 412 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 LLGL2Q6P1M3 1020 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 PGBD2Q6P3X8 592 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 ZPBP2Q6X784 338 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 NANOGNBQ7Z5D8 188 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 KBTBD8Q8NFY9 601 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 OR52K2Q8NGK3 314 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 VPS4AQ9UN37 437 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 NEURL4Q96JN8 1562 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 A0A1W2PPM1 405 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 KPNA6O60684 536 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 NR2F1P10589 423 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 CTBP1Q13363 440 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 XKR6Q5GH73 641 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 LPCAT4Q643R3 524 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 MORF4L1Q9UBU8 362 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 SAMHD1Q9Y3Z3 626 aaKnown RBP18.09■□□□□ 0.49
COL5A3-201ENST00000264828 EPHB6O15197 1021 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 MLYCDO95822 493 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 SERPINA6P08185 405 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 FAR1Q8WVX9 515 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 SENP8Q96LD8 212 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 Q96MT0 163 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 CAB39LQ9H9S4 337 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 SORCS3Q9UPU3 1222 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 C2orf71A6NGG8 1288 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 H7C0S8 307 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 WNT10BO00744 389 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 SGTAO43765 313 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 SNAP91O60641 907 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 S100A9P06702 114 aaKnown RBP18.09■□□□□ 0.49
COL5A3-201ENST00000264828 UGT2B15P54855 530 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 MYBPC1Q00872 1141 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 RPTNQ6XPR3 784 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 RP9Q8TA86 221 aaKnown RBP18.09■□□□□ 0.49
COL5A3-201ENST00000264828 MAGEC3Q8TD91 643 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 HPS1Q92902 700 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 MLPHQ9BV36 600 aaPredicted RBP18.09■□□□□ 0.49
COL5A3-201ENST00000264828 PNPLA3Q9NST1 481 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 PHF11Q9UIL8 331 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 A8MUI8 341 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 LCA5LO95447 670 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 CHRNGP07510 517 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 GOT1P17174 413 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 STARP49675 285 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 MARSP56192 900 aaKnown RBP18.09■□□□□ 0.49
COL5A3-201ENST00000264828 ILF2Q12905 390 aaKnown RBP18.09■□□□□ 0.49
COL5A3-201ENST00000264828 PPIL2Q13356 520 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 MIIPQ5JXC2 388 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 AGMOQ6ZNB7 445 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 ZNHIT2Q9UHR6 403 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 ITGA2BP08514 1039 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 MAGP20916 626 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 TTKP33981 857 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 RPL5P46777 297 aaKnown RBP18.09■□□□□ 0.49
COL5A3-201ENST00000264828 CLCN5P51795 746 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 ZNF143P52747 638 aaPredicted RBP18.09■□□□□ 0.49
COL5A3-201ENST00000264828 MAXP61244 160 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 AFTPHQ6ULP2 937 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 GPRIN3Q6ZVF9 776 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 GPC2Q8N158 579 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 LENG9Q96B70 501 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 QRFPRQ96P65 431 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 IGFLR1Q9H665 355 aa18.09■□□□□ 0.49
COL5A3-201ENST00000264828 POLR3HQ9Y535 204 aaPredicted RBP18.09■□□□□ 0.49
COL5A3-201ENST00000264828 SLC28A1O00337 649 aa18.08■□□□□ 0.49
COL5A3-201ENST00000264828 MTRF1O75570 445 aaKnown RBP18.08■□□□□ 0.49
COL5A3-201ENST00000264828 POLR2LP62875 67 aaKnown RBP18.08■□□□□ 0.49
COL5A3-201ENST00000264828 ABRQ12979 859 aa18.08■□□□□ 0.49
COL5A3-201ENST00000264828 OLFML2AQ68BL7 652 aa18.08■□□□□ 0.49
COL5A3-201ENST00000264828 EMID1Q96A84 441 aaPredicted RBP18.08■□□□□ 0.49
COL5A3-201ENST00000264828 GLIS2Q9BZE0 524 aaPredicted RBP18.08■□□□□ 0.49
COL5A3-201ENST00000264828 DHRS12A0PJE2 317 aa18.08■□□□□ 0.49
COL5A3-201ENST00000264828 FGF10O15520 208 aaPredicted RBP18.08■□□□□ 0.49
COL5A3-201ENST00000264828 GUCY1B2O75343 617 aa18.08■□□□□ 0.49
COL5A3-201ENST00000264828 TCEA3O75764 348 aa18.08■□□□□ 0.49
COL5A3-201ENST00000264828 FADS2O95864 444 aaKnown RBP18.08■□□□□ 0.49
COL5A3-201ENST00000264828 MYL9P24844 172 aa18.08■□□□□ 0.49
COL5A3-201ENST00000264828 YTHDF3Q7Z739 585 aaKnown RBP18.08■□□□□ 0.49
COL5A3-201ENST00000264828 OR4A15Q8NGL6 344 aa18.08■□□□□ 0.49
COL5A3-201ENST00000264828 TCF12Q99081 682 aa18.08■□□□□ 0.49
COL5A3-201ENST00000264828 BIRC5O15392 142 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 PAPSS1O43252 624 aaPredicted RBP18.08■□□□□ 0.48
COL5A3-201ENST00000264828 ACSL4O60488 711 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 CATP04040 527 aaKnown RBP18.08■□□□□ 0.48
COL5A3-201ENST00000264828 HNMTP50135 292 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 USP4Q13107 963 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 BTG3Q14201 252 aaPredicted RBP18.08■□□□□ 0.48
COL5A3-201ENST00000264828 PPM1LQ5SGD2 360 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 LIPMQ5VYY2 423 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 MAP1SQ66K74 1059 aaPredicted RBP18.08■□□□□ 0.48
COL5A3-201ENST00000264828 SFRP1Q8N474 314 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 SCAIQ8N9R8 606 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 GIPC3Q8TF64 312 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 RHOBTB2Q9BYZ6 727 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 TM6SF2Q9BZW4 377 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 SNX15Q9NRS6 342 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 A0A088AWK7 358 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 MGRN1O60291 552 aa18.08■□□□□ 0.48
COL5A3-201ENST00000264828 ZNF10P21506 573 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms