RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 DPY30Q9C005 99 aa11.08□□□□□ -0.63
CCDC170-201ENST00000239374 IMPAD1Q9NX62 359 aa11.08□□□□□ -0.63
CCDC170-201ENST00000239374 SMPD3Q9NY59 655 aaPredicted RBP11.08□□□□□ -0.63
CCDC170-201ENST00000239374 RCOR3Q9P2K3 495 aaPredicted RBP11.08□□□□□ -0.63
CCDC170-201ENST00000239374 ZDHHC2Q9UIJ5 367 aa11.08□□□□□ -0.63
CCDC170-201ENST00000239374 LEF1Q9UJU2 399 aaPredicted RBP11.08□□□□□ -0.63
CCDC170-201ENST00000239374 ITGB1BP2Q9UKP3 347 aa11.08□□□□□ -0.63
CCDC170-201ENST00000239374 VWA7Q9Y334 891 aa11.08□□□□□ -0.63
CCDC170-201ENST00000239374 TAS2R39P59534 338 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 C10orf120Q5SQS8 335 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 STXBP5Q5T5C0 1151 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 TRAF7Q6Q0C0 670 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 POTEHQ6S545 545 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 LZTR1Q8N653 840 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 SPATA22Q8NHS9 363 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 ASB9Q96DX5 294 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 SLC39A3Q9BRY0 314 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 GPR63Q9BZJ6 419 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 GBA2Q9HCG7 927 aaPredicted RBP11.08□□□□□ -0.64
CCDC170-201ENST00000239374 ABCB10Q9NRK6 738 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 TPRKBQ9Y3C4 175 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 CASTOR2A6NHX0 329 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 MATN2O00339 956 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 VPS4BO75351 444 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 PTPN3P26045 913 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 ADORA2AP29274 412 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 SLC7A1P30825 629 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 CCR10P46092 362 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 ST13P50502 369 aaKnown RBP11.08□□□□□ -0.64
CCDC170-201ENST00000239374 TMEM26Q6ZUK4 368 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 SZRD1Q7Z422 152 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 ANKRD13AQ8IZ07 590 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 MOCOSQ96EN8 888 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 C19orf60Q96EN9 201 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 LPIN3Q9BQK8 851 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 ZNF556Q9HAH1 456 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 KANSL3Q9P2N6 904 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 TUBGCP4Q9UGJ1 667 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 VPS9D1Q9Y2B5 631 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 RBMX2Q9Y388 322 aaKnown RBP11.08□□□□□ -0.64
CCDC170-201ENST00000239374 CCDC88AQ3V6T2 1871 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 ZSCAN9O15535 394 aaPredicted RBP11.08□□□□□ -0.64
CCDC170-201ENST00000239374 ALOX12P18054 663 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 FMO4P31512 558 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 RPS9P46781 194 aaKnown RBP11.08□□□□□ -0.64
CCDC170-201ENST00000239374 PPM1FP49593 454 aaPredicted RBP11.08□□□□□ -0.64
CCDC170-201ENST00000239374 ENTPD1P49961 510 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 KIAA1841Q6NSI8 718 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 KCTD8Q6ZWB6 473 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 PLPPR4Q7Z2D5 763 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 TBC1D21Q8IYX1 336 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 OR56A4Q8NGH8 313 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 CENPNQ96H22 339 aaPredicted RBP11.08□□□□□ -0.64
CCDC170-201ENST00000239374 ZFYVE19Q96K21 471 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 EURLQ9NYK6 297 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 FAM32AQ9Y421 112 aaKnown RBP11.08□□□□□ -0.64
CCDC170-201ENST00000239374 XPAP23025 273 aaPredicted RBP11.08□□□□□ -0.64
CCDC170-201ENST00000239374 MAXP61244 160 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 UBE3AQ05086 875 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 ESRP1Q6NXG1 681 aaKnown RBP11.08□□□□□ -0.64
CCDC170-201ENST00000239374 ARHGAP36Q6ZRI8 547 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 MARVELD2Q8N4S9 558 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 PSMA8Q8TAA3 256 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 HEXDCQ8WVB3 486 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 HPS1Q92902 700 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 DPEP3Q9H4B8 488 aa11.08□□□□□ -0.64
CCDC170-201ENST00000239374 SEC24AO95486 1093 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 HIST1H2AGP0C0S8 130 aaPredicted RBP11.07□□□□□ -0.64
CCDC170-201ENST00000239374 HIST1H2ADP20671 130 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 CD86P42081 329 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 CTC1Q2NKJ3 1217 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 MAP1SQ66K74 1059 aaPredicted RBP11.07□□□□□ -0.64
CCDC170-201ENST00000239374 IL27RAQ6UWB1 636 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 SYTL1Q8IYJ3 562 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 CAPSLQ8WWF8 208 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 HDAC10Q969S8 669 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 PIWIL1Q96J94 861 aaKnown RBP11.07□□□□□ -0.64
CCDC170-201ENST00000239374 HIST1H2AHQ96KK5 128 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 HIST1H2AJQ99878 128 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 GPATCH1Q9BRR8 931 aaKnown RBP11.07□□□□□ -0.64
CCDC170-201ENST00000239374 H2AFJQ9BTM1 129 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 SENP6Q9GZR1 1112 aaPredicted RBP11.07□□□□□ -0.64
CCDC170-201ENST00000239374 REXO4Q9GZR2 422 aaKnown RBP11.07□□□□□ -0.64
CCDC170-201ENST00000239374 FANCEQ9HB96 536 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 EIF2B3Q9NR50 452 aaKnown RBP11.07□□□□□ -0.64
CCDC170-201ENST00000239374 GIMAP4Q9NUV9 329 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 ZMYM5Q9UJ78 669 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 BCAS2O75934 225 aaPredicted RBP11.07□□□□□ -0.64
CCDC170-201ENST00000239374 GUCA1CO95843 209 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 ODC1P11926 461 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 ZNF132P52740 706 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 EFEMP1Q12805 493 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 BNIP3Q12983 259 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 SLC10A6Q3KNW5 377 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 OR8H2Q8N162 312 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 STAG3L4Q8TBR4 150 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 HM13Q8TCT9 377 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 TRMOQ9BU70 441 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 USE1Q9NZ43 259 aa11.07□□□□□ -0.64
CCDC170-201ENST00000239374 CNOT6Q9ULM6 557 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms