RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 ZC3HC1Q86WB0 502 aaKnown RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 CNTN4Q8IWV2 1026 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 KLHDC8BQ8IXV7 354 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 LRRC52Q8N7C0 313 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 C12orf29Q8N999 325 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 TFAP2CQ92754 450 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 ABTB1Q969K4 478 aaPredicted RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 TMA16Q96EY4 203 aaKnown RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 SLC9A7Q96T83 725 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 TSEN34Q9BSV6 310 aaKnown RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 YTHDF1Q9BYJ9 559 aaKnown RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 TRPV6Q9H1D0 765 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 GBA3Q9H227 469 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 PRDM12Q9H4Q4 367 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 C20orf96Q9NUD7 363 aaPredicted RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 TBC1D23Q9NUY8 699 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 TMEM9Q9P0T7 183 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 PACSIN3Q9UKS6 424 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 BLOC1S6Q9UL45 172 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 G3BP2Q9UN86 482 aaKnown RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 SNX9Q9Y5X1 595 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 MOXD2PA6NHM9 499 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 TRIM64BA6NI03 449 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 M0QZ92 97 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 RPLP2P05387 115 aaKnown RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 MYF6P23409 242 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 HCAR3P49019 387 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 NAGLUP54802 743 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 PHEXP78562 749 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 GALNT1Q10472 559 aaPredicted RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 GLRA4Q5JXX5 417 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 ALKAL1Q6UXT8 129 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 HERC6Q8IVU3 1022 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 ROPN1LQ96C74 230 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 TCF12Q99081 682 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 SLC25A23Q9BV35 468 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 NXF3Q9H4D5 531 aaKnown RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 CAAP1Q9H8G2 361 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 CD320Q9NPF0 282 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 CACNA2D2Q9NY47 1150 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 KLHL8Q9P2G9 620 aaPredicted RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 WDR37Q9Y2I8 494 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 hCG_2014768A0A024R1R8 64 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 KANSL1LA0AUZ9 987 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 BBIP1A8MTZ0 92 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 TK2O00142 265 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 DCLK1O15075 740 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 AMHP03971 560 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 CTSHP09668 335 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 PORP16435 677 aaPredicted RBP16.05■□□□□ 0.16
SF3A2-201ENST00000221494 TKTL1P51854 596 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 NME5P56597 212 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 ZNF829Q3KNS6 432 aaPredicted RBP16.05■□□□□ 0.16
SF3A2-201ENST00000221494 PRMT9Q6P2P2 845 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 ERMP1Q7Z2K6 904 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 LINC00523Q86TU6 105 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 ACOT1Q86TX2 421 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 CAMK1DQ8IU85 385 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 CCDC117Q8IWD4 279 aaPredicted RBP16.05■□□□□ 0.16
SF3A2-201ENST00000221494 LPGAT1Q92604 370 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 NT5C3BQ969T7 300 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 ISOC1Q96CN7 298 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 SNX27Q96L92 541 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 ZMAT2Q96NC0 199 aaKnown RBP16.05■□□□□ 0.16
SF3A2-201ENST00000221494 AGAP2Q99490 1192 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 NPAS2Q99743 824 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 TRMT13Q9NUP7 481 aaKnown RBP16.05■□□□□ 0.16
SF3A2-201ENST00000221494 TMEM181Q9P2C4 612 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 PAIP2BQ9ULR5 123 aaKnown RBP16.05■□□□□ 0.16
SF3A2-201ENST00000221494 ACOT9Q9Y305 439 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 TSC2P49815 1807 aa16.05■□□□□ 0.16
SF3A2-201ENST00000221494 CEP350Q5VT06 3117 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 A0A087X1B8 175 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 MYOCOSA0A1B0GUC4 107 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 AQP12BA6NM10 295 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 SLC35E2BP0CK96 405 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 PTPN3P26045 913 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 NDST2P52849 883 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 ZBTB6Q15916 424 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 NRF1Q16656 503 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 SOWAHAQ2M3V2 549 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 PDCD4Q53EL6 469 aaKnown RBP16.04■□□□□ 0.16
SF3A2-201ENST00000221494 SLC44A4Q53GD3 710 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 FAM182AQ5T1J6 154 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 ZBTB49Q6ZSB9 765 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 AQP12AQ8IXF9 295 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 CRYBG2Q8N1P7 616 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 AGR3Q8TD06 166 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 LRTOMTQ8WZ04 291 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 SLCO4A1Q96BD0 722 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 ITPKCQ96DU7 683 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 SCYL1Q96KG9 808 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 GLT1D1Q96MS3 346 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 MRPL57Q9BQC6 102 aaKnown RBP16.04■□□□□ 0.16
SF3A2-201ENST00000221494 KIFC1Q9BW19 673 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 RHOBTB2Q9BYZ6 727 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 RNF39Q9H2S5 420 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 MRPL46Q9H2W6 279 aaKnown RBP16.04■□□□□ 0.16
SF3A2-201ENST00000221494 CAB39LQ9H9S4 337 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 MEAF6Q9HAF1 191 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms