RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 MESP1Q9BRJ9 268 aa7.55□□□□□ -1.2
NECAP1-220ENST00000639841 TINAGL1Q9GZM7 467 aaPredicted RBP7.55□□□□□ -1.2
NECAP1-220ENST00000639841 OR10A5Q9H207 317 aa7.55□□□□□ -1.2
NECAP1-220ENST00000639841 SLC35D1Q9NTN3 355 aa7.55□□□□□ -1.2
NECAP1-220ENST00000639841 SMIM30A4D0T7 59 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 AQP7P3A6NL99 342 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 ENO4A6NNW6 628 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 FADS2P1A8MWK0 482 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 KCNJ18B7U540 433 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 M0QYG6 137 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 SPRY1O43609 319 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-220ENST00000639841 CCNT2O60583 730 aaKnown RBP7.54□□□□□ -1.2
NECAP1-220ENST00000639841 UQCRFS1P1P0C7P4 283 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 FAM87AP0C7U9 286 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 RPA1P27694 616 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 ADSSP30520 456 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 BTDP43251 543 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 RFX5P48382 616 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-220ENST00000639841 PMS2P54278 862 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 EIF3BP55884 814 aaKnown RBP7.54□□□□□ -1.2
NECAP1-220ENST00000639841 GMFBP60983 142 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 ACTR1AP61163 376 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 KCNJ12Q14500 433 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 CST9LP1Q5W188 147 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 CES4AQ5XG92 561 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 KANK2Q63ZY3 851 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 ERN2Q76MJ5 926 aaKnown RBP7.54□□□□□ -1.2
NECAP1-220ENST00000639841 PARS2Q7L3T8 475 aaKnown RBP7.54□□□□□ -1.2
NECAP1-220ENST00000639841 GAS2L3Q86XJ1 694 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 FBXO11Q86XK2 927 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 FOXP4Q8IVH2 680 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-220ENST00000639841 DNERQ8NFT8 737 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 SLC2A12Q8TD20 617 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 POMGNT1Q8WZA1 660 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 PRCCQ92733 491 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-220ENST00000639841 INTS4Q96HW7 963 aaKnown RBP7.54□□□□□ -1.2
NECAP1-220ENST00000639841 CACNG6Q9BXT2 260 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 API5Q9BZZ5 524 aaKnown RBP7.54□□□□□ -1.2
NECAP1-220ENST00000639841 FAM83DQ9H4H8 585 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 GPR35Q9HC97 309 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 MRPS18AQ9NVS2 196 aaKnown RBP7.54□□□□□ -1.2
NECAP1-220ENST00000639841 DUSP13Q9UII6 198 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 OSGIN1Q9UJX0 560 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 CDYLQ9Y232 598 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 FRMPD3Q5JV73 1810 aa7.54□□□□□ -1.2
NECAP1-220ENST00000639841 GOLGA6L10A0A0M3HER8 536 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 TEX22C9J3V5 150 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 GFRA3O60609 400 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 CHN1P15882 459 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 ZFXP17010 805 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-220ENST00000639841 PNPLA4P41247 253 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 ASMTP46597 345 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 CORO7P57737 925 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 PRAMEP78395 509 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 GEN1Q17RS7 908 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 USP39Q53GS9 565 aaKnown RBP7.53□□□□□ -1.2
NECAP1-220ENST00000639841 MTHFD1LQ6UB35 978 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 C1orf229Q6ZS94 237 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-220ENST00000639841 PLEKHH3Q7Z736 793 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 USP37Q86T82 979 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 FAM160B2Q86V87 743 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 ARHGAP12Q8IWW6 846 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 PLD5Q8N7P1 536 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 INTS14Q96SY0 518 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 PACSIN1Q9BY11 444 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 WDR11Q9BZH6 1224 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 TM9SF3Q9HD45 589 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 TMLHEQ9NVH6 421 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 RLIMQ9NVW2 624 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 INTS6Q9UL03 887 aaKnown RBP7.53□□□□□ -1.2
NECAP1-220ENST00000639841 MKLN1Q9UL63 735 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 NENFQ9UMX5 172 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 CAPN7Q9Y6W3 813 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 PLXNB2O15031 1838 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 A0A0A0MRY4 1105 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 LINC00854A0A1B0GVQ3 168 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 SLC15A5A6NIM6 579 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 ZNF785A8K8V0 405 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 LACTBL1A8MY62 500 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 KPNA7A9QM74 516 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 SLC43A1O75387 559 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 PENKP01210 267 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-220ENST00000639841 HLA-DOAP06340 250 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 CASTP20810 708 aaKnown RBP7.53□□□□□ -1.2
NECAP1-220ENST00000639841 MFAP4P55083 255 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 BACE1P56817 501 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 RUNX1T1Q06455 604 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 SPP2Q13103 211 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 HSP90AA5PQ58FG0 334 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 CDKAL1Q5VV42 579 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 ERICH6BQ5W0A0 696 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 SARM1Q6SZW1 724 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 ATG9AQ7Z3C6 839 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 HOOK3Q86VS8 718 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 BCL6BQ8N143 479 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-220ENST00000639841 MB21D1Q8N884 522 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 PTGR2Q8N8N7 351 aaPredicted RBP7.53□□□□□ -1.2
NECAP1-220ENST00000639841 SLC13A3Q8WWT9 602 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 SEC14L1Q92503 715 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 RNFT2Q96EX2 444 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms