RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 FGL2Q14314 439 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 IRF3Q14653 427 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 LPIN1Q14693 890 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 RFTN1Q14699 578 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 ZMYND11Q15326 602 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 RPS6KA1Q15418 735 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 ZRSR1Q15695 479 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 CHRNA6Q15825 494 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 FAM187BQ17R55 369 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 SMTNL2Q2TAL5 461 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 C3orf36Q3SXR2 165 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 ANKRD20A4Q4UJ75 823 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 SLC9B1Q4ZJI4 515 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PAN2Q504Q3 1202 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 GLE1Q53GS7 698 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 ARHGAP15Q53QZ3 475 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 ANKRD20A8PQ5CZ79 823 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PPP6R3Q5H9R7 873 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 ANKRD20A2Q5SQ80 823 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 SPATA46Q5T0L3 261 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 SLC35F1Q5T1Q4 408 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 TTC22Q5TAA0 569 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 ANKRD20A1Q5TYW2 823 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PRAMEF20Q5VT98 475 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 ANKRD20A3Q5VUR7 823 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PPP1R2P3Q6NXS1 205 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 TMEM53Q6P2H8 277 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 TRIM65Q6PJ69 517 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 AFTPHQ6ULP2 937 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 RBM43Q6ZSC3 357 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 MIGA2Q7L4E1 593 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 NLRP9Q7RTR0 991 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 OVCH1Q7RTY7 1134 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 KCNK18Q7Z418 384 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 KIAA1328Q86T90 577 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 KBTBD6Q86V97 674 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 NUDT13Q86X67 352 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 DNAAF5Q86Y56 855 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 CCDC117Q8IWD4 279 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 TMEM192Q8IY95 271 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 TTLL6Q8N841 843 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 FRMD1Q8N878 549 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 NAT16Q8N8M0 369 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 ANKFN1Q8N957 763 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 EIF1ADQ8N9N8 165 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 PIK3C3Q8NEB9 887 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 TRPV1Q8NER1 839 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 AKR7LQ8NHP1 331 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 CPT1CQ8TCG5 803 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 ZNF384Q8TF68 577 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 DCAF4Q8WV16 495 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 DNAJA4Q8WW22 397 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 TCP11Q8WWU5 503 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 SLC9A6Q92581 669 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 RGMAQ96B86 450 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PTERQ96BW5 349 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 MIEF2Q96C03 454 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 HMCESQ96FZ2 354 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PGM2Q96G03 612 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 C1orf159Q96HA4 380 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 APOPT1Q96IL0 206 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 RBM41Q96IZ5 413 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 FAM71F1Q96KD3 344 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 RPGRIP1Q96KN7 1286 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 RPRD1AQ96P16 312 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 GAL3ST4Q96RP7 486 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 SECISBP2Q96T21 854 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 PLIN2Q99541 437 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 MTG1Q9BT17 334 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 C11orf84Q9BUA3 381 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 MLPHQ9BV36 600 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 BTBD2Q9BX70 525 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 FRMD8P1Q9BZ68 369 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 WNT8AQ9H1J5 351 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 SLC25A18Q9H1K4 315 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PABPC3Q9H361 631 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 RAD21L1Q9H4I0 556 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 LRRC40Q9H9A6 602 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 NTN4Q9HB63 628 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PALMDQ9NP74 551 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 TOMM22Q9NS69 142 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 FARSBQ9NSD9 589 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 RBM12Q9NTZ6 932 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 ARHGEF38Q9NXL2 777 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 TAS2R10Q9NYW0 307 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PLA2G3Q9NZ20 509 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 CNIH4Q9P003 139 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 ASH2LQ9UBL3 628 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 CPNE7Q9UBL6 633 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 DPP7Q9UHL4 492 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 SATB2Q9UPW6 733 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 TBC1D30Q9Y2I9 924 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 KCNK7Q9Y2U2 307 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 MRPS2Q9Y399 296 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 EMC9Q9Y3B6 208 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 RWDD3Q9Y3V2 267 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 SPATA31A3Q5VYP0 1347 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PLEKHG2Q9H7P9 1386 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 A0A1B0GUA9 196 aa3.06□□□□□ -1.92
VIM-210ENST00000637053 A0A1W2PPW3 197 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms