RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 EML3Q32P44 896 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.81□□□□□ -0.68
PSPC1-207ENST00000635251 TIGD5Q53EQ6 642 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 BTBD8Q5XKL5 378 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 ZNF280DQ6N043 979 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 TIGD7Q6NT04 549 aaPredicted RBP10.81□□□□□ -0.68
PSPC1-207ENST00000635251 NEPROQ6NW34 567 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 KLC3Q6P597 504 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 ANKRD23Q86SG2 305 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 LILRA2Q8N149 483 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 LZTR1Q8N653 840 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 PTCD2Q8WV60 388 aaKnown RBP10.81□□□□□ -0.68
PSPC1-207ENST00000635251 NCSTNQ92542 709 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 PPP1R2P1Q96PQ5 205 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 IL12RB2Q99665 862 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 KATNAL1Q9BW62 490 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 EML4Q9HC35 981 aaKnown RBP10.81□□□□□ -0.68
PSPC1-207ENST00000635251 CSNK1G1Q9HCP0 422 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 TRPC7Q9HCX4 862 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 UBAP1Q9NZ09 502 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 SFMBT1Q9UHJ3 866 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 LZTS1Q9Y250 596 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 UTRNP46939 3433 aa10.81□□□□□ -0.68
PSPC1-207ENST00000635251 FGF10O15520 208 aaPredicted RBP10.8□□□□□ -0.68
PSPC1-207ENST00000635251 PAGE1O75459 146 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 OR6B1O95007 311 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 HSPA13P48723 471 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 SH3BGRP55822 239 aaPredicted RBP10.8□□□□□ -0.68
PSPC1-207ENST00000635251 ITKQ08881 620 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 STX5Q13190 355 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 RBM20Q5T481 1227 aaKnown RBP10.8□□□□□ -0.68
PSPC1-207ENST00000635251 C6orf52Q5T4I8 152 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 AGAP9Q5VTM2 703 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 C9orf131Q5VYM1 1079 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 KIAA0930Q6ICG6 404 aaPredicted RBP10.8□□□□□ -0.68
PSPC1-207ENST00000635251 CCDC117Q8IWD4 279 aaPredicted RBP10.8□□□□□ -0.68
PSPC1-207ENST00000635251 GABPB2Q8TAK5 448 aaPredicted RBP10.8□□□□□ -0.68
PSPC1-207ENST00000635251 NMD3Q96D46 503 aaKnown RBP10.8□□□□□ -0.68
PSPC1-207ENST00000635251 MAELQ96JY0 434 aaKnown RBP10.8□□□□□ -0.68
PSPC1-207ENST00000635251 FAR2Q96K12 515 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 FCRL2Q96LA5 508 aaPredicted RBP10.8□□□□□ -0.68
PSPC1-207ENST00000635251 KLHL32Q96NJ5 620 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 PARK7Q99497 189 aaKnown RBP10.8□□□□□ -0.68
PSPC1-207ENST00000635251 PAAF1Q9BRP4 392 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 TRIM62Q9BVG3 475 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 PRKD2Q9BZL6 878 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 MRM3Q9HC36 420 aaKnown RBP10.8□□□□□ -0.68
PSPC1-207ENST00000635251 MRPL40Q9NQ50 206 aaKnown RBP10.8□□□□□ -0.68
PSPC1-207ENST00000635251 ST3GAL5Q9UNP4 418 aa10.8□□□□□ -0.68
PSPC1-207ENST00000635251 PRSS51A0A1B0GVH4 220 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 ARL5CA6NH57 179 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 AURKAO14965 403 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 UBDO15205 165 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 IRAK2O43187 625 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 MSI1O43347 362 aaKnown RBP10.79□□□□□ -0.68
PSPC1-207ENST00000635251 TNFAIP8O95379 198 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 SMIM18P0DKX4 95 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 ATP6V1B1P15313 513 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 CCR1P32246 355 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 ADRA1AP35348 466 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 RPL5P46777 297 aaKnown RBP10.79□□□□□ -0.68
PSPC1-207ENST00000635251 PLK1P53350 603 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 DNAJB13P59910 316 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 SULT2A1Q06520 285 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 MAP7Q14244 749 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 FASTKQ14296 549 aaKnown RBP10.79□□□□□ -0.68
PSPC1-207ENST00000635251 FAM110CQ1W6H9 321 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 AGKQ53H12 422 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 NOMO2Q5JPE7 1267 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 BRMS1LQ5PSV4 323 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 IYDQ6PHW0 289 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 RPS27LQ71UM5 84 aaKnown RBP10.79□□□□□ -0.68
PSPC1-207ENST00000635251 KLHDC8BQ8IXV7 354 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 SCAMP5Q8TAC9 235 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 CALML6Q8TD86 181 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 HASPINQ8TF76 798 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 CCDC126Q96EE4 140 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 PHF21BQ96EK2 531 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 ZNF419Q96HQ0 510 aaPredicted RBP10.79□□□□□ -0.68
PSPC1-207ENST00000635251 MRGPRX2Q96LB1 330 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 HAPLN3Q96S86 360 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 ZCWPW1Q9H0M4 648 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 IGSF5Q9NSI5 407 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 TREX1Q9NSU2 369 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 NDFIP2Q9NV92 336 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 CCDC167Q9P0B6 97 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 PSMD12O00232 456 aaPredicted RBP10.79□□□□□ -0.68
PSPC1-207ENST00000635251 ACOT8O14734 319 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 TRPA1O75762 1119 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 RTN3O95197 1032 aaPredicted RBP10.79□□□□□ -0.68
PSPC1-207ENST00000635251 CTSHP09668 335 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 LTA4HP09960 611 aaKnown RBP10.79□□□□□ -0.68
PSPC1-207ENST00000635251 FAM58BPP0C7Q3 252 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 CCDC166P0CW27 439 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 BRCC3P46736 316 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 MRPS6P82932 125 aaKnown RBP10.79□□□□□ -0.68
PSPC1-207ENST00000635251 SQLEQ14534 574 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 SLC5A9Q2M3M2 681 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 TECRLQ5HYJ1 363 aa10.79□□□□□ -0.68
PSPC1-207ENST00000635251 CUZD1Q86UP6 607 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms