RNA–Protein interactions for RNA: ENST00000629069.1

NCBP1-205, Transcript of nuclear cap binding protein subunit 1, human

TSL 5 BASIC

Gene NCBP1, Length 249 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCBP1-205	ENST00000629069	LIFR	P42702	1097 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	CENPA	P49450	140 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	RHBDL3	P58872	404 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	GRSF1	Q12849	480 aa	Known RBP eCLIP	2.58	□□□□□ -2
NCBP1-205	ENST00000629069	DHX34	Q14147	1143 aa	Known RBP	2.58	□□□□□ -2
NCBP1-205	ENST00000629069	TAF5	Q15542	800 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	SLC18A3	Q16572	532 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	FBXO43	Q4G163	708 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	FAM76B	Q5HYJ3	339 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	C10orf62	Q5T681	223 aa	Predicted RBP	2.58	□□□□□ -2
NCBP1-205	ENST00000629069	ZNF329	Q86UD4	541 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	MOGAT3	Q86VF5	341 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	FTSJ3	Q8IY81	847 aa	Known RBP	2.58	□□□□□ -2
NCBP1-205	ENST00000629069	AADAT	Q8N5Z0	425 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	NEXN-AS1	Q8NBZ9	246 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	SPPL3	Q8TCT6	385 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	TMEM170A	Q8WVE7	144 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	NR4A3	Q92570	626 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	CNOT9	Q92600	299 aa	Known RBP	2.58	□□□□□ -2
NCBP1-205	ENST00000629069	SLC39A13	Q96H72	371 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	COG8	Q96MW5	612 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	YME1L1	Q96TA2	773 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	IL25	Q9H293	177 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	MROH8	Q9H579	483 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	STN1	Q9H668	368 aa	Known RBP	2.58	□□□□□ -2
NCBP1-205	ENST00000629069	DDX31	Q9H8H2	851 aa	Known RBP	2.58	□□□□□ -2
NCBP1-205	ENST00000629069	TCF7L2	Q9NQB0	619 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	ANKRD10	Q9NXR5	420 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	MDFIC	Q9P1T7	246 aa		2.58	□□□□□ -2
NCBP1-205	ENST00000629069	KIF26B	Q2KJY2	2108 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	2.57	□□□□□ -2
NCBP1-205	ENST00000629069	ARHGAP10	A1A4S6	786 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069		B9A039	149 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	EBAG9	O00559	213 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	PER2	O15055	1255 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	KLK10	O43240	276 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	DHX16	O60231	1041 aa	Known RBP	2.57	□□□□□ -2
NCBP1-205	ENST00000629069	VNN2	O95498	520 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	AFP	P02771	609 aa	Known RBP	2.57	□□□□□ -2
NCBP1-205	ENST00000629069	PCNA	P12004	261 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	ZNF8	P17098	575 aa	Predicted RBP	2.57	□□□□□ -2
NCBP1-205	ENST00000629069	BLK	P51451	505 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	KRTAP10-7	P60409	375 aa	Predicted RBP	2.57	□□□□□ -2
NCBP1-205	ENST00000629069	YWHAZ	P63104	245 aa	Known RBP	2.57	□□□□□ -2
NCBP1-205	ENST00000629069	POU5F1B	Q06416	359 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	ARHGEF6	Q15052	776 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	NAPEPLD	Q6IQ20	393 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	RHBDF2	Q6PJF5	856 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	SHF	Q7M4L6	423 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	PRSS45	Q7RTY3	260 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	CPXM2	Q8N436	756 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	RFLNB	Q8N5W9	214 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	USP38	Q8NB14	1042 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	SPATA5	Q8NB90	893 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	ARRDC2	Q8TBH0	407 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	NOC3L	Q8WTT2	800 aa	Known RBP	2.57	□□□□□ -2
NCBP1-205	ENST00000629069	SECTM1	Q8WVN6	248 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	RAB40A	Q8WXH6	277 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	BICD1	Q96G01	975 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	ZC3HAV1L	Q96H79	300 aa	Known RBP	2.57	□□□□□ -2
NCBP1-205	ENST00000629069	LRFN5	Q96NI6	719 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	IL17F	Q96PD4	163 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	INPP4A	Q96PE3	977 aa	Predicted RBP	2.57	□□□□□ -2
NCBP1-205	ENST00000629069	CD180	Q99467	661 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	EPYC	Q99645	322 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	SLC32A1	Q9H598	525 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	EPHX3	Q9H6B9	360 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	CYSLTR2	Q9NS75	346 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	NDRG3	Q9UGV2	375 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	PCDHGB5	Q9Y5G0	923 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	PCDHAC2	Q9Y5I4	1007 aa		2.57	□□□□□ -2
NCBP1-205	ENST00000629069	TAF1	P21675	1872 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	C17orf113	A0A1B0GUU1	675 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	hDV102S1	A0JD36	115 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	VWA3A	A6NCI4	1184 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	SH2D7	A6NKC9	451 aa	Predicted RBP	2.56	□□□□□ -2
NCBP1-205	ENST00000629069	TSPAN3	O60637	253 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	NBN	O60934	754 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	TCEA3	O75764	348 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	KRT36	O76013	467 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	MTA2	O94776	668 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	RGS11	O94810	467 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	F7	P08709	466 aa	Predicted RBP	2.56	□□□□□ -2
NCBP1-205	ENST00000629069	CNP	P09543	421 aa	Known RBP	2.56	□□□□□ -2
NCBP1-205	ENST00000629069	IGHV4-30-4	P0DP06	118 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	TTK	P33981	857 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	DLX5	P56178	289 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	ACSM2A	Q08AH3	577 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	TBL3	Q12788	808 aa	Known RBP	2.56	□□□□□ -2
NCBP1-205	ENST00000629069	DLG1	Q12959	904 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	SLC12A1	Q13621	1099 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	NAA25	Q14CX7	972 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	ZRSR1	Q15695	479 aa	Known RBP	2.56	□□□□□ -2
NCBP1-205	ENST00000629069	OTUD3	Q5T2D3	398 aa	Predicted RBP	2.56	□□□□□ -2
NCBP1-205	ENST00000629069	UNQ6126/PRO20091	Q6UXV3	157 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	CCDC129	Q6ZRS4	1044 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	USP43	Q70EL4	1123 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	2.56	□□□□□ -2
NCBP1-205	ENST00000629069	TBC1D26	Q86UD7	250 aa		2.56	□□□□□ -2
NCBP1-205	ENST00000629069	EXOC3L1	Q86VI1	746 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms