RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ECSITQ9BQ95 431 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 ZYG11BQ9C0D3 744 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 ARHGAP39Q9C0H5 1083 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 GREB1Q4ZG55 1949 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 LOC100653049A0A140TA62 436 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 KRT34O76011 436 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 SORBS2O94875 1100 aaKnown RBP9.52□□□□□ -0.89
PDPN-212ENST00000621990 PDHA1P08559 390 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 LINGO3P0C6S8 592 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 CPB1P15086 417 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 SAT1P21673 171 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 ATP5F1P24539 256 aaPredicted RBP9.52□□□□□ -0.89
PDPN-212ENST00000621990 EPHA3P29320 983 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 FLT3LGP49771 235 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 SERPINH1P50454 418 aaKnown RBP9.52□□□□□ -0.89
PDPN-212ENST00000621990 CLCN5P51795 746 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 IHHQ14623 411 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 SH2D4BQ5SQS7 431 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 GLB1LQ6UWU2 654 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 TXNDC5Q8NBS9 432 aaKnown RBP9.52□□□□□ -0.89
PDPN-212ENST00000621990 HEXDCQ8WVB3 486 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 UCMAQ8WVF2 138 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 MOCOSQ96EN8 888 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 ELMO2Q96JJ3 720 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 UBXN10Q96LJ8 280 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 SHCBP1LQ9BZQ2 653 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 TRMT13Q9NUP7 481 aaKnown RBP9.52□□□□□ -0.89
PDPN-212ENST00000621990 NCKIPSDQ9NZQ3 722 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 NUDT5Q9UKK9 219 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 CDYLQ9Y232 598 aa9.52□□□□□ -0.89
PDPN-212ENST00000621990 DPPA5A6NC42 116 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 CASQ2O14958 399 aaPredicted RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 CA12O43570 354 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 TADA2AO75478 443 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 PDE5AO76074 875 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 MOCS2O96007 188 aaPredicted RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 IGLV3-27P01718 113 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 MYCNP04198 464 aaPredicted RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 JUNP05412 331 aaKnown RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 SLC26A3P40879 764 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 TBX4P57082 545 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 XIAPP98170 497 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 PFKPQ01813 784 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 SATB1Q01826 763 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 SREBF2Q12772 1141 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 CDC16Q13042 620 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 PEX6Q13608 980 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 TECRLQ5HYJ1 363 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 ACBD5Q5T8D3 534 aaPredicted RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 IZUMO2Q6UXV1 221 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 SLC24A5Q71RS6 500 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 HPS6Q86YV9 775 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 AGR3Q8TD06 166 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 HMCESQ96FZ2 354 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 TTC1Q99614 292 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 NUF2Q9BZD4 464 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 ZBTB26Q9HCK0 441 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 ABI2Q9NYB9 513 aaPredicted RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 STK39Q9UEW8 545 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 SUFUQ9UMX1 484 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 CHD5Q8TDI0 1954 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 GOLGA8QA0A0J9YX86 632 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 GOLGA8OA6NCC3 632 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 DRGXA6NNA5 263 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 GOLGA8NF8WBI6 632 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 H3BNX3 289 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 J3KR12 359 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 AURKAO14965 403 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 SYN3O14994 580 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 SLC7A4O43246 635 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 HSPA1AP0DMV8 641 aaKnown RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 HSPA1BP0DMV9 641 aaKnown RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 HAPLN1P10915 354 aaPredicted RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 CD1EP15812 388 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 TM4SF4P48230 202 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 EPHB1P54762 984 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 USP46P62068 366 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 SLC10A7Q0GE19 358 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 GALNT1Q10472 559 aaPredicted RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 ILF2Q12905 390 aaKnown RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 MRPL58Q14197 206 aaKnown RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 BTG3Q14201 252 aaPredicted RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 RFTN1Q14699 578 aaPredicted RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 MARC1Q5VT66 337 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 OR52E8Q6IFG1 317 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 CNSTQ6PJW8 725 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 C16orf89Q6UX73 402 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 CILP2Q8IUL8 1156 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 SCN4BQ8IWT1 228 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 PELI3Q8N2H9 469 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 KYQ8NBH2 561 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 PCSK9Q8NBP7 692 aaKnown RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 GABPB2Q8TAK5 448 aaPredicted RBP9.51□□□□□ -0.89
PDPN-212ENST00000621990 PYDC1Q8WXC3 89 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 LINC01599Q8WXQ3 324 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 SPDL1Q96EA4 605 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 CCDC126Q96EE4 140 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 IFT43Q96FT9 208 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 BTN2A3PQ96KV6 586 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 OLFM1Q99784 485 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms