RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 NSUN2Q08J23 767 aaKnown RBP eCLIP16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 CRYMQ14894 314 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 PCSK7Q16549 785 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 STXBP5Q5T5C0 1151 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 FYB2Q5VWT5 728 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 PDPK2PQ6A1A2 396 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 ALG1LQ6GMV1 187 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 TPGS1Q6ZTW0 290 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 PAF1Q8N7H5 531 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 PPM1NQ8N819 430 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 SPATA22Q8NHS9 363 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 ZNF669Q96BR6 464 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 MYEOVQ96EZ4 313 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 SRPK1Q96SB4 655 aaKnown RBP16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 MGME1Q9BQP7 344 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 CAPS2Q9BXY5 557 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 ADGRE3Q9BY15 652 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 SYBUQ9NX95 663 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 PSD3Q9NYI0 1048 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 GDE1Q9NZC3 331 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 WNT16Q9UBV4 365 aa16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 SMG5Q9UPR3 1016 aaKnown RBP16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 ZFHX2Q9C0A1 2572 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC3-210ENST00000617904 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 KRBA1A5PL33 1030 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 PRR23AA6NEV1 266 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 GFRA2O00451 464 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 INSIG1O15503 277 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 USP12O75317 370 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 ALDH1A2O94788 518 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 MT-CYBP00156 380 aaPredicted RBP16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 ADH1CP00326 375 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 MT-ND3P03897 115 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 NNMTP40261 264 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 CSKP41240 450 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 GRIA1P42261 906 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 PLK1P53350 603 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 CDK18Q07002 472 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 DNAJC3Q13217 504 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 MTM1Q13496 603 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 ZNF77Q15935 545 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 KBTBD12Q3ZCT8 623 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 ARID3BQ8IVW6 561 aaPredicted RBP16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 SH2D3CQ8N5H7 860 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 CALML6Q8TD86 181 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 SLC44A1Q8WWI5 657 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 IRF7Q92985 503 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 WBP2Q969T9 261 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 NXPE3Q969Y0 559 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 NUDCD1Q96RS6 583 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 RANBP9Q96S59 729 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 BBS2Q9BXC9 721 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 SPHK2Q9NRA0 654 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 OBP2AQ9NY56 170 aa16.96■□□□□ 0.3
TRAPPC3-210ENST00000617904 DOCK6Q96HP0 2047 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 FAM159BA6NKW6 160 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 MOSPD3O75425 235 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 SNRPAP09012 282 aaKnown RBP16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 LAMP2P13473 410 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 CEBPBP17676 345 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 ADRA1AP35348 466 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 SGSHP51688 502 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 MAXP61244 160 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 AP1S1P61966 158 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 PDE1BQ01064 536 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 DSC2Q02487 901 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 RAD51Q06609 339 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 UGP2Q16851 508 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 SLC5A9Q2M3M2 681 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 PKN3Q6P5Z2 889 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 KDELC1Q6UW63 502 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 RANBP10Q6VN20 620 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 MARK2Q7KZI7 788 aaKnown RBP16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 TMEM135Q86UB9 458 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 RASSF3Q86WH2 238 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 IGDCC3Q8IVU1 814 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 NDUFAF2Q8N183 169 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 DTWD2Q8NBA8 298 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 MRRFQ96E11 262 aaKnown RBP16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 CERS2Q96G23 380 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 MRGPRX2Q96LB1 330 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 APOL2Q9BQE5 337 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 KIFC1Q9BW19 673 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 KCNK9Q9NPC2 374 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 MOCS1Q9NZB8 636 aa16.95■□□□□ 0.3
TRAPPC3-210ENST00000617904 SHROOM3Q8TF72 1996 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 ANHXE9PGG2 379 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 TMCC1O94876 653 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 NFATC1O95644 943 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 CRTAMO95727 393 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 NDST3O95803 873 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 IGSF6O95976 241 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 SRFP11831 508 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 BRAFP15056 766 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 SCNN1BP51168 640 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 NTHL1P78549 312 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 THOC5Q13769 683 aaKnown RBP16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 SEPT6Q14141 434 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 GRM3Q14832 879 aa16.94■□□□□ 0.3
TRAPPC3-210ENST00000617904 PREPLQ4J6C6 727 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms