RNA–Protein interactions for RNA: ENST00000582565.1

NCOR1-222, Transcript of nuclear receptor corepressor 1, human

TSL 4

Gene NCOR1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-222	ENST00000582565	LGR4	Q9BXB1	951 aa		10.75	□□□□□ -0.69
NCOR1-222	ENST00000582565	PABPC3	Q9H361	631 aa	Known RBP	10.75	□□□□□ -0.69
NCOR1-222	ENST00000582565	SGK2	Q9HBY8	427 aa		10.75	□□□□□ -0.69
NCOR1-222	ENST00000582565	CNGB3	Q9NQW8	809 aa		10.75	□□□□□ -0.69
NCOR1-222	ENST00000582565	ABCC13	Q9NSE7	274 aa		10.75	□□□□□ -0.69
NCOR1-222	ENST00000582565	HESX1	Q9UBX0	185 aa		10.75	□□□□□ -0.69
NCOR1-222	ENST00000582565	SHROOM3	Q8TF72	1996 aa		10.75	□□□□□ -0.69
NCOR1-222	ENST00000582565	COL5A1	P20908	1838 aa	Predicted RBP	10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565		A0A1B0GTQ1	180 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565		A0A1W2PPC4	97 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565		A0A1W2PQ27	194 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565		A0A1W2PQ64	194 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565		A0A1W2PR77	199 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	CETN3	O15182	167 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	VILL	O15195	856 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	ACSL4	O60488	711 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	ZNF202	O95125	648 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	KCNH1	O95259	989 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	ITGAV	P06756	1048 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	RNASE1	P07998	156 aa	Known RBP	10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	SETSIP	P0DME0	302 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	EPB41	P11171	864 aa	Known RBP	10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	POLR2E	P19388	210 aa	Known RBP	10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	ENDOU	P21128	410 aa	Known RBP	10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	CSK	P41240	450 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	GRK6	P43250	576 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	NOP2	P46087	812 aa	Known RBP	10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	CCT8	P50990	548 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	GALC	P54803	685 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	SLC8A3	P57103	927 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	HNRNPA1L2	Q32P51	320 aa	Known RBP	10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	CCDC157	Q569K6	752 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	FSCB	Q5H9T9	825 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	RALGPS1	Q5JS13	557 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	C9orf64	Q5T6V5	341 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	ANKRD40	Q6AI12	368 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	NCEH1	Q6PIU2	408 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	ZNF227	Q86WZ6	799 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	GATAD2A	Q86YP4	633 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	SIX6OS1	Q8N1H7	587 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	FIBIN	Q8TAL6	211 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	SLC35C1	Q96A29	364 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	CCDC47	Q96A33	483 aa	Known RBP	10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	CCDC120	Q96HB5	630 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	FCRL2	Q96LA5	508 aa	Predicted RBP	10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	SLC12A9	Q9BXP2	914 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	NEUROG2	Q9H2A3	272 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	FBXL12	Q9NXK8	326 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	SUN2	Q9UH99	717 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	XPO7	Q9UIA9	1087 aa	Known RBP	10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565	TMEM59L	Q9UK28	342 aa		10.74	□□□□□ -0.69
NCOR1-222	ENST00000582565		A0A087WV48	116 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	TMEM82	A0PJX8	343 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	TRIM49B	A6NDI0	452 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	FAM47DP	A6NHR8	397 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	TTC34	A8MYJ7	566 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	MID1	O15344	667 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	SLC16A3	O15427	465 aa	Known RBP	10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	STX10	O60499	249 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	ATP5B	P06576	529 aa	Known RBP	10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	HSP90AA1	P07900	732 aa	Known RBP	10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	GSTM1	P09488	218 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	TBX4	P57082	545 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	KRT85	P78386	507 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	PNOC	Q13519	176 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	CNGA2	Q16280	664 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	DPY19L1	Q2PZI1	675 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	TTC31	Q49AM3	519 aa	Predicted RBP	10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	TCERG1L	Q5VWI1	586 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	TMEM270	Q6UE05	265 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	USP30	Q70CQ3	517 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	MFN1	Q8IWA4	741 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	TRIM59	Q8IWR1	403 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	DHX40	Q8IX18	779 aa	Known RBP	10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	CFAP52	Q8N1V2	620 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	GALNT15	Q8N3T1	639 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	AADAT	Q8N5Z0	425 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	LMO3	Q8TAP4	145 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	DQX1	Q8TE96	717 aa	Known RBP	10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	IRGQ	Q8WZA9	623 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	GOLGA1	Q92805	767 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	ERCC4	Q92889	916 aa	Predicted RBP	10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	AZIN2	Q96A70	460 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	SLCO3A1	Q9UIG8	710 aa		10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	FLNB	O75369	2602 aa	Known RBP	10.73	□□□□□ -0.69
NCOR1-222	ENST00000582565	PLK4	O00444	970 aa		10.72	□□□□□ -0.69
NCOR1-222	ENST00000582565	IRAK2	O43187	625 aa		10.72	□□□□□ -0.69
NCOR1-222	ENST00000582565	LTF	P02788	710 aa		10.72	□□□□□ -0.69
NCOR1-222	ENST00000582565	PAEP	P09466	180 aa		10.72	□□□□□ -0.69
NCOR1-222	ENST00000582565	SLC11A2	P49281	568 aa		10.72	□□□□□ -0.69
NCOR1-222	ENST00000582565	METAP1	P53582	386 aa		10.72	□□□□□ -0.69
NCOR1-222	ENST00000582565	DNAJC3	Q13217	504 aa		10.72	□□□□□ -0.69
NCOR1-222	ENST00000582565	CST6	Q15828	149 aa		10.72	□□□□□ -0.69
NCOR1-222	ENST00000582565	DCAF6	Q58WW2	860 aa		10.72	□□□□□ -0.69
NCOR1-222	ENST00000582565	MS4A13	Q5J8X5	152 aa		10.72	□□□□□ -0.69
NCOR1-222	ENST00000582565	PITRM1	Q5JRX3	1037 aa		10.72	□□□□□ -0.69
NCOR1-222	ENST00000582565	NUGGC	Q68CJ6	796 aa		10.72	□□□□□ -0.69
NCOR1-222	ENST00000582565	MMAA	Q8IVH4	418 aa	Known RBP	10.72	□□□□□ -0.69
NCOR1-222	ENST00000582565	UNC45B	Q8IWX7	931 aa		10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms