RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	IL12RB2	Q99665	862 aa		11.78	□□□□□ -0.52
CDK5RAP3-223	ENST00000582114	EPAS1	Q99814	870 aa		11.78	□□□□□ -0.52
CDK5RAP3-223	ENST00000582114	NCAPG	Q9BPX3	1015 aa		11.78	□□□□□ -0.52
CDK5RAP3-223	ENST00000582114	OSBPL1A	Q9BXW6	950 aa		11.78	□□□□□ -0.52
CDK5RAP3-223	ENST00000582114	LMBRD1	Q9NUN5	540 aa		11.78	□□□□□ -0.52
CDK5RAP3-223	ENST00000582114	EVA1B	Q9NVM1	165 aa		11.78	□□□□□ -0.52
CDK5RAP3-223	ENST00000582114	GPATCH2L	Q9NWQ4	482 aa		11.78	□□□□□ -0.52
CDK5RAP3-223	ENST00000582114	PMS2P1	A4D2B8	440 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RASA4B	C9J798	803 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	AREL1	O15033	823 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RASA4	O43374	803 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TM7SF2	O76062	418 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ZIC2	O95409	532 aa	Predicted RBP	11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PRKCG	P05129	697 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CALB1	P05937	261 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TIMP2	P16035	220 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	XPA	P23025	273 aa	Predicted RBP	11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PCBP4	P57723	403 aa	Known RBP	11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RPL7A	P62424	266 aa	Known RBP	11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RAD51	Q06609	339 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	NR0B2	Q15466	257 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	FAXC	Q5TGI0	409 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	NYAP1	Q6ZVC0	841 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	MON1B	Q7L1V2	547 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PHF13	Q86YI8	300 aa	Predicted RBP	11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PHACTR4	Q8IZ21	702 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RTL3	Q8N8U3	475 aa	Known RBP	11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	C3orf20	Q8ND61	904 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	DENND6B	Q8NEG7	585 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	NTAN1	Q96AB6	310 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ARHGEF26	Q96DR7	871 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ATXN7L3B	Q96GX2	97 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CELF6	Q96J87	481 aa	Known RBP	11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	LRRC61	Q9BV99	259 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TTYH3	Q9C0H2	523 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	USP29	Q9HBJ7	922 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CPNE5	Q9HCH3	593 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SIRPG	Q9P1W8	387 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SPAST	Q9UBP0	616 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	LHX3	Q9UBR4	397 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	FZD10	Q9ULW2	581 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SATB2	Q9UPW6	733 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CSNK1G3	Q9Y6M4	447 aa		11.77	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PTPRQ	Q9UMZ3	2332 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114		A0A1W2PNU3	283 aa	Predicted RBP	11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SIGLEC16	A6NMB1	481 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	LGALS16	A8MUM7	142 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TMCO5B	A8MYB1	307 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ATXN7	O15265	892 aa	Predicted RBP	11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	C1QL1	O75973	258 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ANXA6	P08133	673 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TSHR	P16473	764 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	EIF4A3	P38919	411 aa	Known RBP	11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ZNF143	P52747	638 aa	Predicted RBP	11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	GSC	P56915	257 aa	Predicted RBP	11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	UBXN1	Q04323	297 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SERINC3	Q13530	473 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PTK2B	Q14289	1009 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	IRF4	Q15306	451 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CYTH1	Q15438	398 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ISX	Q2M1V0	245 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	GPR155	Q7Z3F1	870 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RD3	Q7Z3Z2	195 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ZSCAN30	Q86W11	494 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	DNAAF5	Q86Y56	855 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SLC35F3	Q8IY50	421 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ZNF248	Q8NDW4	579 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	BTN2A2	Q8WVV5	523 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ASB12	Q8WXK4	309 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	HIC2	Q96JB3	615 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ZNF578	Q96N58	590 aa	Predicted RBP	11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	AGPAT1	Q99943	283 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	C1QTNF7	Q9BXJ2	289 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SLC13A1	Q9BZW2	595 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CLPB	Q9H078	707 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RETREG1	Q9H6L5	497 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	POLR1B	Q9H9Y6	1135 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	GULP1	Q9UBP9	304 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SALL4	Q9UJQ4	1053 aa		11.76	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CXorf51A	A0A1B0GTR3	108 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TCRBV5S1A1T	A0A578	114 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	EME2	A4GXA9	379 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ANKRD62	A6NC57	917 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114		J3KR12	359 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	YY2	O15391	372 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	KLK10	O43240	276 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ATMIN	O43313	823 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PCCB	P05166	539 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CDK11B	P21127	795 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	LSS	P48449	732 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TPI1	P60174	286 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	OGDH	Q02218	1023 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PPARD	Q03181	441 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	C1QBP	Q07021	282 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	C19orf57	Q0VDD7	668 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms