RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 PAPOLAP51003 745 aaKnown RBP12.96□□□□□ -0.33
CCDC57-211ENST00000578187 CCNHP51946 323 aaPredicted RBP12.96□□□□□ -0.33
CCDC57-211ENST00000578187 VAV2P52735 878 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 GSDMDP57764 484 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 MMRN1Q13201 1228 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 HS1BP3Q53T59 392 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 CARD16Q5EG05 197 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 LRRC38Q5VT99 294 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 C11orf63Q6NUN7 778 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 LEKR1Q6ZMV7 388 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 IQCHQ86VS3 1027 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 TRIM69Q86WT6 500 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 VSIG1Q86XK7 387 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 MFSD2AQ8NA29 543 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 CHST14Q8NCH0 376 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 ACRBPQ8NEB7 543 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 OR2AP1Q8NGE2 309 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 VOPP1Q96AW1 172 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 PPP1R16AQ96I34 528 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 CALN1Q9BXU9 219 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 TM6SF2Q9BZW4 377 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 ERVMER34-1Q9H9K5 563 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 TOR4AQ9NXH8 423 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 UBA2Q9UBT2 640 aaPredicted RBP12.96□□□□□ -0.33
CCDC57-211ENST00000578187 IL36AQ9UHA7 158 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 SALL4Q9UJQ4 1053 aa12.96□□□□□ -0.33
CCDC57-211ENST00000578187 PRAMEF26H0Y7S4 382 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 J3KR12 359 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 KPNA3O00505 521 aaPredicted RBP12.95□□□□□ -0.34
CCDC57-211ENST00000578187 PJA2O43164 708 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 RNGTTO60942 597 aaKnown RBP12.95□□□□□ -0.34
CCDC57-211ENST00000578187 LDOC1O95751 146 aaPredicted RBP12.95□□□□□ -0.34
CCDC57-211ENST00000578187 C1SP09871 688 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 COMTP21964 271 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 MAT2AP31153 395 aaKnown RBP12.95□□□□□ -0.34
CCDC57-211ENST00000578187 NOP2P46087 812 aaKnown RBP12.95□□□□□ -0.34
CCDC57-211ENST00000578187 NXPH1P58417 271 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 SNRPD1P62314 119 aaKnown RBP12.95□□□□□ -0.34
CCDC57-211ENST00000578187 IL10RBQ08334 325 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 CNTN1Q12860 1018 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 ANKRD20A8PQ5CZ79 823 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 AGBL4Q5VU57 503 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 NCBP2-AS2Q69YL0 99 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 ARHGAP36Q6ZRI8 547 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 GATAD2AQ86YP4 633 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 MAP7D3Q8IWC1 876 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 TP53INP2Q8IXH6 220 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 NETO2Q8NC67 525 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 KCTD6Q8NC69 237 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 PCDH19Q8TAB3 1148 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 CNDP2Q96KP4 475 aaKnown RBP12.95□□□□□ -0.34
CCDC57-211ENST00000578187 CALR3Q96L12 384 aaKnown RBP12.95□□□□□ -0.34
CCDC57-211ENST00000578187 EBF2Q9HAK2 575 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 HECAQ9UBI9 543 aaPredicted RBP12.95□□□□□ -0.34
CCDC57-211ENST00000578187 LHX3Q9UBR4 397 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 HYOU1Q9Y4L1 999 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 PCDHGA1Q9Y5H4 931 aa12.95□□□□□ -0.34
CCDC57-211ENST00000578187 COL5A1P20908 1838 aaPredicted RBP12.95□□□□□ -0.34
CCDC57-211ENST00000578187 CEP295Q9C0D2 2601 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 A0A1W2PR77 199 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 C3orf70A6NLC5 250 aaPredicted RBP12.94□□□□□ -0.34
CCDC57-211ENST00000578187 RNF103O00237 685 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 DFFAO00273 331 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 ENC1O14682 589 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 PSTPIP1O43586 416 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 SPOPO43791 374 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 MFSD11O43934 449 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 LEFTY1O75610 366 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 DKK1O94907 266 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 WNT1P04628 370 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 KDELR1P24390 212 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 EPHA8P29322 1005 aaPredicted RBP12.94□□□□□ -0.34
CCDC57-211ENST00000578187 DNA2P51530 1060 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 RHOAP61586 193 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 PPP2CBP62714 309 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 PPP2CAP67775 309 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 RFTN1Q14699 578 aaPredicted RBP12.94□□□□□ -0.34
CCDC57-211ENST00000578187 PAFAH1B3Q15102 231 aaKnown RBP12.94□□□□□ -0.34
CCDC57-211ENST00000578187 CYTH1Q15438 398 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 POM121L1PQ3SYA9 428 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 ARSIQ5FYB1 569 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 PIP5KL1Q5T9C9 394 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 NEK5Q6P3R8 708 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 TMPRSS12Q86WS5 348 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 RHOT1Q8IXI2 618 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 PQLC3Q8N755 202 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 TPCN2Q8NHX9 752 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 GRIN3AQ8TCU5 1115 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 SAP25Q8TEE9 199 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 RAPGEF5Q92565 580 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 ARRDC3Q96B67 414 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 LRIG1Q96JA1 1093 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 GDAP1L1Q96MZ0 367 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 ZNF599Q96NL3 588 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 HEPHQ9BQS7 1158 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 LACRTQ9GZZ8 138 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 GOLPH3Q9H4A6 298 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 GRPEL1Q9HAV7 217 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 SP110Q9HB58 689 aa12.94□□□□□ -0.34
CCDC57-211ENST00000578187 IPO11Q9UI26 975 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms